Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLDND2Q8NHS1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLDND2Q8NHS1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDND2Q8NHS1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDND2Q8NHS1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.15■□□□□ 0.5
CLDND2Q8NHS1 SLC25A24-204ENST00000569674 2357 ntBASIC18.15■□□□□ 0.5
CLDND2Q8NHS1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLDND2Q8NHS1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDND2Q8NHS1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLDND2Q8NHS1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDND2Q8NHS1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CLDND2Q8NHS1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 AC092068.2-201ENST00000590491 1708 ntBASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 DUSP8P3-201ENST00000399571 1760 ntBASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDND2Q8NHS1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 KRT18P61-201ENST00000585825 1298 ntBASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLDND2Q8NHS1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDND2Q8NHS1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 AL137060.1-201ENST00000618151 2648 ntBASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDND2Q8NHS1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDND2Q8NHS1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms