Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 LINC00565-201ENST00000562710 2331 ntBASIC18.72■□□□□ 0.59
CPEB3Q8NE35 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 ZNRF2P3-201ENST00000424200 374 ntBASIC18.72■□□□□ 0.59
CPEB3Q8NE35 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CPEB3Q8NE35 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.71■□□□□ 0.59
CPEB3Q8NE35 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 AC012414.1-201ENST00000556676 535 ntBASIC18.71■□□□□ 0.59
CPEB3Q8NE35 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.71■□□□□ 0.59
CPEB3Q8NE35 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 AC026471.6-201ENST00000622954 1905 ntBASIC18.7■□□□□ 0.58
CPEB3Q8NE35 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
CPEB3Q8NE35 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 AL034346.1-201ENST00000568244 1277 ntBASIC18.69■□□□□ 0.58
CPEB3Q8NE35 AL354811.1-201ENST00000610286 706 ntBASIC18.69■□□□□ 0.58
CPEB3Q8NE35 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CPEB3Q8NE35 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 AL358852.1-201ENST00000623174 1268 ntBASIC18.68■□□□□ 0.58
CPEB3Q8NE35 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 BX005040.4-201ENST00000637145 1518 ntBASIC18.68■□□□□ 0.58
CPEB3Q8NE35 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.68■□□□□ 0.58
CPEB3Q8NE35 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 MIR6084-201ENST00000622012 110 ntBASIC18.67■□□□□ 0.58
CPEB3Q8NE35 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms