Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 AC133041.1-202ENST00000642053 222 ntBASIC20.18■□□□□ 0.82
EXD3Q8N9H8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EXD3Q8N9H8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EXD3Q8N9H8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 POU5F1P3-201ENST00000428824 1078 ntBASIC20.16■□□□□ 0.82
EXD3Q8N9H8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EXD3Q8N9H8 AC144652.1-201ENST00000609974 1624 ntBASIC20.16■□□□□ 0.82
EXD3Q8N9H8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 AC073210.2-201ENST00000430369 194 ntBASIC20.15■□□□□ 0.82
EXD3Q8N9H8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 AC098934.4-201ENST00000564127 592 ntBASIC20.15■□□□□ 0.82
EXD3Q8N9H8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 ITM2C-210ENST00000620962 501 ntBASIC20.15■□□□□ 0.82
EXD3Q8N9H8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EXD3Q8N9H8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
EXD3Q8N9H8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 KRT18P29-201ENST00000397031 1267 ntBASIC20.14■□□□□ 0.81
EXD3Q8N9H8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EXD3Q8N9H8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 AC104187.1-201ENST00000607510 612 ntBASIC20.13■□□□□ 0.81
EXD3Q8N9H8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
EXD3Q8N9H8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 PRORSD1P-201ENST00000295112 541 ntBASIC20.12■□□□□ 0.81
EXD3Q8N9H8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EXD3Q8N9H8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms