Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 AC026471.6-201ENST00000622954 1905 ntBASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LSMEM1Q8N8F7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSMEM1Q8N8F7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.58■□□□□ 0.73
LSMEM1Q8N8F7 AC008406.3-201ENST00000620001 1374 ntBASIC19.58■□□□□ 0.73
LSMEM1Q8N8F7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LSMEM1Q8N8F7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LSMEM1Q8N8F7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSMEM1Q8N8F7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.58■□□□□ 0.73
LSMEM1Q8N8F7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LSMEM1Q8N8F7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LSMEM1Q8N8F7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 AC026310.3-201ENST00000625186 2373 ntBASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LSMEM1Q8N8F7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LSMEM1Q8N8F7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 AP004607.7-201ENST00000527152 1677 ntBASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LSMEM1Q8N8F7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 AC104564.3-201ENST00000582367 638 ntBASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LSMEM1Q8N8F7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 AL391422.3-201ENST00000603791 2761 ntBASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LSMEM1Q8N8F7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms