Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 AC091305.1-201ENST00000479476 895 ntBASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.37■■□□□ 1.33
ZC3H3Q8IXZ2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H3Q8IXZ2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H3Q8IXZ2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.35■■□□□ 1.33
ZC3H3Q8IXZ2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H3Q8IXZ2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H3Q8IXZ2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H3Q8IXZ2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
ZC3H3Q8IXZ2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H3Q8IXZ2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.34■■□□□ 1.33
ZC3H3Q8IXZ2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 MIR572-201ENST00000384983 95 ntBASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
ZC3H3Q8IXZ2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZC3H3Q8IXZ2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ZC3H3Q8IXZ2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.32■■□□□ 1.32
ZC3H3Q8IXZ2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H3Q8IXZ2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.32■■□□□ 1.32
ZC3H3Q8IXZ2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
ZC3H3Q8IXZ2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H3Q8IXZ2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ZC3H3Q8IXZ2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
ZC3H3Q8IXZ2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 AC055733.4-201ENST00000638462 1354 ntBASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 AC105233.4-201ENST00000642045 216 ntBASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZC3H3Q8IXZ2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
ZC3H3Q8IXZ2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms