Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 CYP2T1P-201ENST00000432607 1285 ntBASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 AC007322.4-201ENST00000509611 723 ntBASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 AC068338.2-201ENST00000563278 1430 ntBASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 MIR4651-201ENST00000582622 73 ntBASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.12■■□□□ 1.29
NPAS4Q8IUM7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
NPAS4Q8IUM7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 MIR4758-201ENST00000577688 71 ntBASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.1■■□□□ 1.29
NPAS4Q8IUM7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 AC066615.1-201ENST00000640911 628 ntBASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
NPAS4Q8IUM7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 FAM201B-201ENST00000458407 597 ntBASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
NPAS4Q8IUM7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
NPAS4Q8IUM7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
NPAS4Q8IUM7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 OR10C1-204ENST00000622521 1039 ntBASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 MKRN4P-201ENST00000444706 1521 ntBASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
NPAS4Q8IUM7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 MIPEPP3-201ENST00000412105 444 ntBASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 AC120498.10-201ENST00000621827 505 ntBASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
NPAS4Q8IUM7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms