Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS13BQ7Z7G8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
VPS13BQ7Z7G8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
VPS13BQ7Z7G8 AC005224.4-201ENST00000583262 1652 ntBASIC13.33□□□□□ -0.27
VPS13BQ7Z7G8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.33□□□□□ -0.27
VPS13BQ7Z7G8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 RNA5SP413-201ENST00000516373 109 ntBASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 AC010536.3-201ENST00000620306 533 ntBASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 AC068338.2-201ENST00000563278 1430 ntBASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 AC006058.3-201ENST00000606217 1069 ntBASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
VPS13BQ7Z7G8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 AC055733.4-201ENST00000638462 1354 ntBASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
VPS13BQ7Z7G8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 AC008694.1-202ENST00000636953 945 ntBASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VPS13BQ7Z7G8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 AC093787.1-201ENST00000450396 207 ntBASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VPS13BQ7Z7G8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms