Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL55Q7Z7F7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL55Q7Z7F7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 AL356441.2-201ENST00000443009 864 ntBASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 OR2I1P-207ENST00000453522 948 ntBASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 AC079089.2-201ENST00000531211 1277 ntBASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 FAM99A-202ENST00000538190 1989 ntBASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL55Q7Z7F7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 AC010542.4-201ENST00000563151 1910 ntBASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 DUX4L19-201ENST00000557448 1267 ntBASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 OR7E47P-201ENST00000546390 1422 ntBASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL55Q7Z7F7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 AC007375.3-201ENST00000600936 2314 ntBASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL55Q7Z7F7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms