Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.06■□□□□ 0
CSMD3Q7Z407 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSMD3Q7Z407 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.05■□□□□ 0
CSMD3Q7Z407 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSMD3Q7Z407 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.05■□□□□ 0
CSMD3Q7Z407 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CSMD3Q7Z407 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSMD3Q7Z407 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
CSMD3Q7Z407 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD3Q7Z407 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSMD3Q7Z407 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CSMD3Q7Z407 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.05■□□□□ -0
CSMD3Q7Z407 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CSMD3Q7Z407 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD3Q7Z407 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CSMD3Q7Z407 AL512625.2-201ENST00000417533 625 ntBASIC15.05■□□□□ -0
CSMD3Q7Z407 FAM210CP-201ENST00000445714 574 ntBASIC15.05■□□□□ -0
CSMD3Q7Z407 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.05■□□□□ -0
CSMD3Q7Z407 EEF1DP3-203ENST00000566025 782 ntBASIC15.05■□□□□ -0
CSMD3Q7Z407 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.05■□□□□ -0
CSMD3Q7Z407 KRT18P20-201ENST00000548986 1279 ntBASIC15.04■□□□□ -0
CSMD3Q7Z407 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.04■□□□□ -0
CSMD3Q7Z407 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD3Q7Z407 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD3Q7Z407 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.04■□□□□ -0
CSMD3Q7Z407 BX276092.2-201ENST00000417668 665 ntBASIC15.04■□□□□ -0
CSMD3Q7Z407 TERF1P5-201ENST00000477545 1207 ntBASIC15.04■□□□□ -0
CSMD3Q7Z407 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.04■□□□□ -0
CSMD3Q7Z407 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD3Q7Z407 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CSMD3Q7Z407 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC15.04■□□□□ -0
CSMD3Q7Z407 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD3Q7Z407 RPS2P4-201ENST00000476944 856 ntBASIC15.04■□□□□ -0
CSMD3Q7Z407 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.04■□□□□ -0
CSMD3Q7Z407 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CSMD3Q7Z407 ESRRAP1-201ENST00000400596 1257 ntBASIC15.03■□□□□ -0
CSMD3Q7Z407 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.03■□□□□ -0
CSMD3Q7Z407 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.03■□□□□ -0
CSMD3Q7Z407 AC142381.4-202ENST00000563973 229 ntBASIC15.03■□□□□ -0
CSMD3Q7Z407 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.03■□□□□ -0
CSMD3Q7Z407 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.03■□□□□ -0
CSMD3Q7Z407 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.03■□□□□ -0
CSMD3Q7Z407 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.03■□□□□ -0
CSMD3Q7Z407 AC008694.1-202ENST00000636953 945 ntBASIC15.03■□□□□ -0
CSMD3Q7Z407 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.03■□□□□ -0
CSMD3Q7Z407 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.03■□□□□ -0
CSMD3Q7Z407 AC010141.2-201ENST00000452426 721 ntBASIC15.03■□□□□ -0
CSMD3Q7Z407 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.03■□□□□ -0
CSMD3Q7Z407 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.03■□□□□ -0
CSMD3Q7Z407 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.03■□□□□ -0
CSMD3Q7Z407 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.03■□□□□ -0
CSMD3Q7Z407 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD3Q7Z407 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSMD3Q7Z407 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSMD3Q7Z407 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CSMD3Q7Z407 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.02■□□□□ -0
CSMD3Q7Z407 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CSMD3Q7Z407 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD3Q7Z407 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.02□□□□□ -0.01
CSMD3Q7Z407 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.02□□□□□ -0.01
CSMD3Q7Z407 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD3Q7Z407 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD3Q7Z407 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
CSMD3Q7Z407 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.02□□□□□ -0.01
CSMD3Q7Z407 OR10C1-204ENST00000622521 1039 ntBASIC15.02□□□□□ -0.01
CSMD3Q7Z407 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD3Q7Z407 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 AC138907.5-202ENST00000569484 235 ntBASIC15.01□□□□□ -0.01
CSMD3Q7Z407 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 AC020928.2-201ENST00000588717 2197 ntBASIC15.01□□□□□ -0.01
CSMD3Q7Z407 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.01□□□□□ -0.01
CSMD3Q7Z407 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms