Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 AC233723.2-201ENST00000623798 2106 ntBASIC21.54■■□□□ 1.04
GDPD4Q6W3E5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
GDPD4Q6W3E5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDPD4Q6W3E5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.54■■□□□ 1.04
GDPD4Q6W3E5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
GDPD4Q6W3E5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDPD4Q6W3E5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDPD4Q6W3E5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
GDPD4Q6W3E5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
GDPD4Q6W3E5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GDPD4Q6W3E5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.52■■□□□ 1.03
GDPD4Q6W3E5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GDPD4Q6W3E5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.03
GDPD4Q6W3E5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 AC104187.1-201ENST00000607510 612 ntBASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDPD4Q6W3E5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 GUSBP5-202ENST00000510805 1989 ntBASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 AC242852.2-201ENST00000615738 1807 ntBASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 AC092437.1-201ENST00000624794 1048 ntBASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
GDPD4Q6W3E5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 AC137761.2-201ENST00000561729 223 ntBASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 AC145350.3-201ENST00000569033 163 ntBASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 AL137784.2-201ENST00000607332 1000 ntBASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
GDPD4Q6W3E5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDPD4Q6W3E5 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.47■■□□□ 1.03
GDPD4Q6W3E5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDPD4Q6W3E5 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDPD4Q6W3E5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDPD4Q6W3E5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDPD4Q6W3E5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDPD4Q6W3E5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDPD4Q6W3E5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDPD4Q6W3E5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms