Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL3Q6P499 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 BX842568.3-201ENST00000418104 571 ntBASIC19.44■□□□□ 0.7
NIPAL3Q6P499 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL3Q6P499 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 EDA-201ENST00000338901 1233 ntBASIC19.43■□□□□ 0.7
NIPAL3Q6P499 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 AC008764.7-201ENST00000593779 1081 ntBASIC19.43■□□□□ 0.7
NIPAL3Q6P499 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPAL3Q6P499 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 AC233992.3-201ENST00000607491 485 ntBASIC19.42■□□□□ 0.7
NIPAL3Q6P499 AL355001.2-201ENST00000620617 1191 ntBASIC19.42■□□□□ 0.7
NIPAL3Q6P499 AL031602.1-201ENST00000633169 911 ntBASIC19.42■□□□□ 0.7
NIPAL3Q6P499 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPAL3Q6P499 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 AC068587.7-201ENST00000641602 218 ntBASIC19.41■□□□□ 0.7
NIPAL3Q6P499 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NIPAL3Q6P499 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 AC133561.4-201ENST00000566112 224 ntBASIC19.4■□□□□ 0.7
NIPAL3Q6P499 AC126544.1-201ENST00000580842 1059 ntBASIC19.4■□□□□ 0.7
NIPAL3Q6P499 AC087239.1-201ENST00000622671 572 ntBASIC19.4■□□□□ 0.7
NIPAL3Q6P499 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
NIPAL3Q6P499 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NIPAL3Q6P499 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NIPAL3Q6P499 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.39■□□□□ 0.7
NIPAL3Q6P499 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 AC099791.1-201ENST00000416440 715 ntBASIC19.39■□□□□ 0.69
NIPAL3Q6P499 AP001330.3-201ENST00000520123 633 ntBASIC19.39■□□□□ 0.69
NIPAL3Q6P499 AC027682.1-201ENST00000562846 899 ntBASIC19.39■□□□□ 0.69
NIPAL3Q6P499 AF213884.3-201ENST00000563833 479 ntBASIC19.39■□□□□ 0.69
NIPAL3Q6P499 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.39■□□□□ 0.69
NIPAL3Q6P499 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms