Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TTC38Q5R3I4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TTC38Q5R3I4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TTC38Q5R3I4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TTC38Q5R3I4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TTC38Q5R3I4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TTC38Q5R3I4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TTC38Q5R3I4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TTC38Q5R3I4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC38Q5R3I4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC38Q5R3I4 AC105265.2-201ENST00000467189 838 ntBASIC24.38■■□□□ 1.49
TTC38Q5R3I4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC38Q5R3I4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC38Q5R3I4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC38Q5R3I4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TTC38Q5R3I4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.38■■□□□ 1.49
TTC38Q5R3I4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 AP006587.3-201ENST00000525742 1516 ntBASIC24.37■■□□□ 1.49
TTC38Q5R3I4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TTC38Q5R3I4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TTC38Q5R3I4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TTC38Q5R3I4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.35■■□□□ 1.49
TTC38Q5R3I4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
TTC38Q5R3I4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.35■■□□□ 1.49
TTC38Q5R3I4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.35■■□□□ 1.49
TTC38Q5R3I4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.35■■□□□ 1.49
TTC38Q5R3I4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TTC38Q5R3I4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TTC38Q5R3I4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TTC38Q5R3I4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TTC38Q5R3I4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.34■■□□□ 1.49
TTC38Q5R3I4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TTC38Q5R3I4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TTC38Q5R3I4 AC012414.1-201ENST00000556676 535 ntBASIC24.34■■□□□ 1.49
TTC38Q5R3I4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.34■■□□□ 1.49
TTC38Q5R3I4 BX005040.4-201ENST00000637145 1518 ntBASIC24.34■■□□□ 1.49
TTC38Q5R3I4 AC244015.2-201ENST00000616358 1861 ntBASIC24.34■■□□□ 1.49
TTC38Q5R3I4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
TTC38Q5R3I4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.33■■□□□ 1.49
TTC38Q5R3I4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms