Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6AP1LQ52LC2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.64■□□□□ 0.9
ATP6AP1LQ52LC2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP6AP1LQ52LC2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
ATP6AP1LQ52LC2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.64■□□□□ 0.9
ATP6AP1LQ52LC2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP6AP1LQ52LC2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 AC010141.3-201ENST00000456659 717 ntBASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6AP1LQ52LC2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 FEM1AP4-201ENST00000443167 1987 ntBASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6AP1LQ52LC2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6AP1LQ52LC2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6AP1LQ52LC2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6AP1LQ52LC2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP6AP1LQ52LC2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6AP1LQ52LC2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6AP1LQ52LC2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATP6AP1LQ52LC2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ATP6AP1LQ52LC2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6AP1LQ52LC2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 OXCT2P1-201ENST00000447263 1535 ntBASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 AF106564.1-201ENST00000607058 2553 ntBASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP6AP1LQ52LC2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 AC010525.1-201ENST00000585559 441 ntBASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 AL512631.2-201ENST00000604634 923 ntBASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ATP6AP1LQ52LC2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ATP6AP1LQ52LC2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms