Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXF1Q12946 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXF1Q12946 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXF1Q12946 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
FOXF1Q12946 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 AC005224.4-201ENST00000583262 1652 ntBASIC19.4■□□□□ 0.7
FOXF1Q12946 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
FOXF1Q12946 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXF1Q12946 YBX1P1-201ENST00000445822 960 ntBASIC19.4■□□□□ 0.7
FOXF1Q12946 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FOXF1Q12946 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 AC026471.6-201ENST00000622954 1905 ntBASIC19.4■□□□□ 0.7
FOXF1Q12946 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXF1Q12946 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.39■□□□□ 0.7
FOXF1Q12946 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXF1Q12946 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.39■□□□□ 0.7
FOXF1Q12946 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
FOXF1Q12946 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXF1Q12946 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FOXF1Q12946 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.39■□□□□ 0.7
FOXF1Q12946 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXF1Q12946 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FOXF1Q12946 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXF1Q12946 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXF1Q12946 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXF1Q12946 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXF1Q12946 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXF1Q12946 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
FOXF1Q12946 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXF1Q12946 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXF1Q12946 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXF1Q12946 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
FOXF1Q12946 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXF1Q12946 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXF1Q12946 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXF1Q12946 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXF1Q12946 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXF1Q12946 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXF1Q12946 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXF1Q12946 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
FOXF1Q12946 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXF1Q12946 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXF1Q12946 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXF1Q12946 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXF1Q12946 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXF1Q12946 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXF1Q12946 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXF1Q12946 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXF1Q12946 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXF1Q12946 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
FOXF1Q12946 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXF1Q12946 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXF1Q12946 AC055733.4-201ENST00000638462 1354 ntBASIC19.36■□□□□ 0.69
FOXF1Q12946 LINC02228-203ENST00000641970 1355 ntBASIC19.36■□□□□ 0.69
FOXF1Q12946 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FOXF1Q12946 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXF1Q12946 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXF1Q12946 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
FOXF1Q12946 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXF1Q12946 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXF1Q12946 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
FOXF1Q12946 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXF1Q12946 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
FOXF1Q12946 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.36■□□□□ 0.69
FOXF1Q12946 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FOXF1Q12946 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXF1Q12946 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
FOXF1Q12946 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXF1Q12946 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXF1Q12946 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXF1Q12946 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.35■□□□□ 0.69
FOXF1Q12946 AC123595.1-201ENST00000440769 1046 ntBASIC19.35■□□□□ 0.69
FOXF1Q12946 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.35■□□□□ 0.69
FOXF1Q12946 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXF1Q12946 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FOXF1Q12946 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXF1Q12946 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms