Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRKDCP78527 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.77■□□□□ 0.11
PRKDCP78527 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRKDCP78527 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRKDCP78527 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRKDCP78527 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.76■□□□□ 0.11
PRKDCP78527 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.76■□□□□ 0.11
PRKDCP78527 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.76■□□□□ 0.11
PRKDCP78527 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
PRKDCP78527 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.76■□□□□ 0.11
PRKDCP78527 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
PRKDCP78527 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.76■□□□□ 0.11
PRKDCP78527 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.76■□□□□ 0.11
PRKDCP78527 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.76■□□□□ 0.11
PRKDCP78527 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRKDCP78527 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PRKDCP78527 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.76■□□□□ 0.11
PRKDCP78527 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.76■□□□□ 0.11
PRKDCP78527 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRKDCP78527 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
PRKDCP78527 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.76■□□□□ 0.11
PRKDCP78527 AC010141.3-201ENST00000456659 717 ntBASIC15.76■□□□□ 0.11
PRKDCP78527 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRKDCP78527 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
PRKDCP78527 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 TSPY7P-201ENST00000431358 1114 ntBASIC15.75■□□□□ 0.11
PRKDCP78527 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.75■□□□□ 0.11
PRKDCP78527 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.75■□□□□ 0.11
PRKDCP78527 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRKDCP78527 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.75■□□□□ 0.11
PRKDCP78527 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.75■□□□□ 0.11
PRKDCP78527 KRT18P20-201ENST00000548986 1279 ntBASIC15.75■□□□□ 0.11
PRKDCP78527 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.75■□□□□ 0.11
PRKDCP78527 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PRKDCP78527 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.75■□□□□ 0.11
PRKDCP78527 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.75■□□□□ 0.11
PRKDCP78527 SHF-206ENST00000560471 2499 ntTSL 5 BASIC15.75■□□□□ 0.11
PRKDCP78527 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.75■□□□□ 0.11
PRKDCP78527 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PRKDCP78527 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.75■□□□□ 0.11
PRKDCP78527 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 AC138907.5-202ENST00000569484 235 ntBASIC15.75■□□□□ 0.11
PRKDCP78527 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PRKDCP78527 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.75■□□□□ 0.11
PRKDCP78527 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.75■□□□□ 0.11
PRKDCP78527 AC233702.5-201ENST00000584107 538 ntBASIC15.75■□□□□ 0.11
PRKDCP78527 AL121894.2-201ENST00000602977 491 ntBASIC15.75■□□□□ 0.11
PRKDCP78527 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRKDCP78527 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PRKDCP78527 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PRKDCP78527 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC15.74■□□□□ 0.11
PRKDCP78527 OXCT2P1-201ENST00000447263 1535 ntBASIC15.74■□□□□ 0.11
PRKDCP78527 AL353708.3-201ENST00000610272 989 ntBASIC15.74■□□□□ 0.11
PRKDCP78527 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRKDCP78527 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRKDCP78527 AC087499.1-201ENST00000418141 1075 ntBASIC15.74■□□□□ 0.11
PRKDCP78527 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.74■□□□□ 0.11
PRKDCP78527 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PRKDCP78527 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRKDCP78527 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.74■□□□□ 0.11
PRKDCP78527 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.74■□□□□ 0.11
PRKDCP78527 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRKDCP78527 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PRKDCP78527 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRKDCP78527 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.73■□□□□ 0.11
PRKDCP78527 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRKDCP78527 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PRKDCP78527 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.73■□□□□ 0.11
PRKDCP78527 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRKDCP78527 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRKDCP78527 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.73■□□□□ 0.11
PRKDCP78527 AC069236.1-201ENST00000604339 616 ntBASIC15.73■□□□□ 0.11
PRKDCP78527 AC069544.1-201ENST00000609399 999 ntBASIC15.73■□□□□ 0.11
PRKDCP78527 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRKDCP78527 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.73■□□□□ 0.11
PRKDCP78527 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.73■□□□□ 0.11
PRKDCP78527 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKDCP78527 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRKDCP78527 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKDCP78527 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKDCP78527 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRKDCP78527 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKDCP78527 AL162412.1-201ENST00000567129 965 ntBASIC15.72■□□□□ 0.11
PRKDCP78527 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.72■□□□□ 0.11
PRKDCP78527 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.72■□□□□ 0.11
PRKDCP78527 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRKDCP78527 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRKDCP78527 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.72■□□□□ 0.11
PRKDCP78527 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms