Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPL38P63173 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPL38P63173 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPL38P63173 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RPL38P63173 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RPL38P63173 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RPL38P63173 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.58■□□□□ 0.88
RPL38P63173 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RPL38P63173 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.58■□□□□ 0.88
RPL38P63173 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL38P63173 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL38P63173 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL38P63173 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL38P63173 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPL38P63173 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL38P63173 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RPL38P63173 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.57■□□□□ 0.88
RPL38P63173 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.57■□□□□ 0.88
RPL38P63173 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RPL38P63173 OXCT2P1-201ENST00000447263 1535 ntBASIC20.57■□□□□ 0.88
RPL38P63173 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RPL38P63173 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RPL38P63173 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.57■□□□□ 0.88
RPL38P63173 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
RPL38P63173 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.56■□□□□ 0.88
RPL38P63173 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.56■□□□□ 0.88
RPL38P63173 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL38P63173 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.56■□□□□ 0.88
RPL38P63173 AL138724.1-201ENST00000606771 1088 ntBASIC20.56■□□□□ 0.88
RPL38P63173 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.56■□□□□ 0.88
RPL38P63173 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RPL38P63173 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RPL38P63173 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.56■□□□□ 0.88
RPL38P63173 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.55■□□□□ 0.88
RPL38P63173 AF106564.1-201ENST00000607058 2553 ntBASIC20.55■□□□□ 0.88
RPL38P63173 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL38P63173 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.55■□□□□ 0.88
RPL38P63173 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL38P63173 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL38P63173 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RPL38P63173 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.55■□□□□ 0.88
RPL38P63173 DUX4L19-201ENST00000557448 1267 ntBASIC20.55■□□□□ 0.88
RPL38P63173 AC104564.3-201ENST00000582367 638 ntBASIC20.55■□□□□ 0.88
RPL38P63173 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.55■□□□□ 0.88
RPL38P63173 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL38P63173 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL38P63173 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.55■□□□□ 0.88
RPL38P63173 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.55■□□□□ 0.88
RPL38P63173 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.55■□□□□ 0.88
RPL38P63173 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RPL38P63173 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RPL38P63173 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.55■□□□□ 0.88
RPL38P63173 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RPL38P63173 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RPL38P63173 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL38P63173 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPL38P63173 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL38P63173 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPL38P63173 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RPL38P63173 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RPL38P63173 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.54■□□□□ 0.88
RPL38P63173 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL38P63173 AC131281.2-201ENST00000520478 145 ntBASIC20.54■□□□□ 0.88
RPL38P63173 AC136469.2-201ENST00000623944 1028 ntBASIC20.54■□□□□ 0.88
RPL38P63173 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.54■□□□□ 0.88
RPL38P63173 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPL38P63173 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.54■□□□□ 0.88
RPL38P63173 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RPL38P63173 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.54■□□□□ 0.88
RPL38P63173 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RPL38P63173 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.53■□□□□ 0.88
RPL38P63173 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.53■□□□□ 0.88
RPL38P63173 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
RPL38P63173 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 SLC47A1P1-202ENST00000449666 945 ntBASIC20.53■□□□□ 0.88
RPL38P63173 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.53■□□□□ 0.88
RPL38P63173 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPL38P63173 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 FEM1AP4-201ENST00000443167 1987 ntBASIC20.53■□□□□ 0.88
RPL38P63173 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.53■□□□□ 0.88
RPL38P63173 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.53■□□□□ 0.88
RPL38P63173 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.53■□□□□ 0.88
RPL38P63173 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.53■□□□□ 0.88
RPL38P63173 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPL38P63173 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPL38P63173 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPL38P63173 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.52■□□□□ 0.88
RPL38P63173 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RPL38P63173 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPL38P63173 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPL38P63173 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms