Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBA52P62987 AC131274.2-201ENST00000580697 1507 ntBASIC18.32■□□□□ 0.52
UBA52P62987 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBA52P62987 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UBA52P62987 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.31■□□□□ 0.52
UBA52P62987 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UBA52P62987 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.31■□□□□ 0.52
UBA52P62987 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.31■□□□□ 0.52
UBA52P62987 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 AC087623.3-201ENST00000607047 1098 ntBASIC18.31■□□□□ 0.52
UBA52P62987 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.31■□□□□ 0.52
UBA52P62987 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
UBA52P62987 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBA52P62987 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
UBA52P62987 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.3■□□□□ 0.52
UBA52P62987 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.3■□□□□ 0.52
UBA52P62987 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UBA52P62987 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.3■□□□□ 0.52
UBA52P62987 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.3■□□□□ 0.52
UBA52P62987 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 AC008764.7-201ENST00000593779 1081 ntBASIC18.3■□□□□ 0.52
UBA52P62987 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.3■□□□□ 0.52
UBA52P62987 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.3■□□□□ 0.52
UBA52P62987 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.3■□□□□ 0.52
UBA52P62987 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
UBA52P62987 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBA52P62987 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBA52P62987 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.29■□□□□ 0.52
UBA52P62987 LINC01521-201ENST00000504184 1943 ntBASIC18.29■□□□□ 0.52
UBA52P62987 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.29■□□□□ 0.52
UBA52P62987 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
UBA52P62987 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
UBA52P62987 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBA52P62987 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.29■□□□□ 0.52
UBA52P62987 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.29■□□□□ 0.52
UBA52P62987 AL162430.1-201ENST00000480705 870 ntBASIC18.29■□□□□ 0.52
UBA52P62987 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.29■□□□□ 0.52
UBA52P62987 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.29■□□□□ 0.52
UBA52P62987 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.29■□□□□ 0.52
UBA52P62987 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
UBA52P62987 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.29■□□□□ 0.52
UBA52P62987 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBA52P62987 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.29■□□□□ 0.52
UBA52P62987 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
UBA52P62987 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBA52P62987 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA52P62987 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UBA52P62987 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA52P62987 FAM99A-202ENST00000538190 1989 ntBASIC18.28■□□□□ 0.52
UBA52P62987 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.28■□□□□ 0.52
UBA52P62987 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBA52P62987 IRS3P-201ENST00000223076 1006 ntBASIC18.28■□□□□ 0.52
UBA52P62987 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA52P62987 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA52P62987 AC005229.4-201ENST00000610085 2198 ntBASIC18.28■□□□□ 0.52
UBA52P62987 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA52P62987 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA52P62987 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
UBA52P62987 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UBA52P62987 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA52P62987 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
UBA52P62987 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA52P62987 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA52P62987 AC009102.2-201ENST00000606772 1639 ntBASIC18.27■□□□□ 0.52
UBA52P62987 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA52P62987 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA52P62987 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
UBA52P62987 AL161729.1-201ENST00000604104 1402 ntBASIC18.27■□□□□ 0.52
UBA52P62987 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA52P62987 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
UBA52P62987 AC099791.1-201ENST00000416440 715 ntBASIC18.27■□□□□ 0.52
UBA52P62987 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.27■□□□□ 0.52
UBA52P62987 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBA52P62987 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBA52P62987 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBA52P62987 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.27■□□□□ 0.51
UBA52P62987 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBA52P62987 AC007952.6-201ENST00000573168 2673 ntBASIC18.26■□□□□ 0.51
UBA52P62987 AC003957.1-201ENST00000625108 2673 ntBASIC18.26■□□□□ 0.51
UBA52P62987 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBA52P62987 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBA52P62987 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBA52P62987 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UBA52P62987 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms