Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.82■□□□□ 0.6
LSM6P62312 AP001330.3-201ENST00000520123 633 ntBASIC18.82■□□□□ 0.6
LSM6P62312 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LSM6P62312 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LSM6P62312 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 RASA4CP-201ENST00000424092 1398 ntBASIC18.81■□□□□ 0.6
LSM6P62312 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LSM6P62312 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.81■□□□□ 0.6
LSM6P62312 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LSM6P62312 AC026471.6-201ENST00000622954 1905 ntBASIC18.8■□□□□ 0.6
LSM6P62312 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.8■□□□□ 0.6
LSM6P62312 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LSM6P62312 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
LSM6P62312 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM6P62312 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM6P62312 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.8■□□□□ 0.6
LSM6P62312 MIR939-201ENST00000401314 82 ntBASIC18.8■□□□□ 0.6
LSM6P62312 AC091305.1-201ENST00000479476 895 ntBASIC18.8■□□□□ 0.6
LSM6P62312 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.8■□□□□ 0.6
LSM6P62312 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM6P62312 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.8■□□□□ 0.6
LSM6P62312 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM6P62312 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.8■□□□□ 0.6
LSM6P62312 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LSM6P62312 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LSM6P62312 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.79■□□□□ 0.6
LSM6P62312 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.79■□□□□ 0.6
LSM6P62312 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.79■□□□□ 0.6
LSM6P62312 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 AL139246.5-201ENST00000606645 996 ntBASIC18.79■□□□□ 0.6
LSM6P62312 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.79■□□□□ 0.6
LSM6P62312 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.79■□□□□ 0.6
LSM6P62312 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.79■□□□□ 0.6
LSM6P62312 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.79■□□□□ 0.6
LSM6P62312 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LSM6P62312 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM6P62312 TSPY26P-201ENST00000476365 1326 ntBASIC18.78■□□□□ 0.6
LSM6P62312 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM6P62312 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM6P62312 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.78■□□□□ 0.6
LSM6P62312 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.78■□□□□ 0.6
LSM6P62312 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LSM6P62312 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LSM6P62312 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM6P62312 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.78■□□□□ 0.6
LSM6P62312 AF213884.3-201ENST00000563833 479 ntBASIC18.78■□□□□ 0.6
LSM6P62312 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.78■□□□□ 0.6
LSM6P62312 AL031432.3-201ENST00000607698 485 ntBASIC18.78■□□□□ 0.6
LSM6P62312 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LSM6P62312 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM6P62312 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LSM6P62312 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.77■□□□□ 0.6
LSM6P62312 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LSM6P62312 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LSM6P62312 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.77■□□□□ 0.6
LSM6P62312 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LSM6P62312 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM6P62312 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.77■□□□□ 0.6
LSM6P62312 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LSM6P62312 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.77■□□□□ 0.6
LSM6P62312 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LSM6P62312 AL136967.2-201ENST00000623968 743 ntBASIC18.77■□□□□ 0.6
LSM6P62312 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.77■□□□□ 0.6
LSM6P62312 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
LSM6P62312 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LSM6P62312 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
LSM6P62312 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LSM6P62312 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LSM6P62312 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
LSM6P62312 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LSM6P62312 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.77■□□□□ 0.59
LSM6P62312 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LSM6P62312 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LSM6P62312 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms