Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.25■□□□□ 0.67
GFRA1P56159 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA1P56159 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
GFRA1P56159 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.25■□□□□ 0.67
GFRA1P56159 AL137784.2-201ENST00000607332 1000 ntBASIC19.25■□□□□ 0.67
GFRA1P56159 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA1P56159 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GFRA1P56159 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GFRA1P56159 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.25■□□□□ 0.67
GFRA1P56159 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.25■□□□□ 0.67
GFRA1P56159 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
GFRA1P56159 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.24■□□□□ 0.67
GFRA1P56159 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
GFRA1P56159 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.24■□□□□ 0.67
GFRA1P56159 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.24■□□□□ 0.67
GFRA1P56159 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.24■□□□□ 0.67
GFRA1P56159 AC006015.1-201ENST00000429970 570 ntBASIC19.24■□□□□ 0.67
GFRA1P56159 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.24■□□□□ 0.67
GFRA1P56159 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.24■□□□□ 0.67
GFRA1P56159 AC104187.1-201ENST00000607510 612 ntBASIC19.24■□□□□ 0.67
GFRA1P56159 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GFRA1P56159 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.23■□□□□ 0.67
GFRA1P56159 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA1P56159 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA1P56159 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.23■□□□□ 0.67
GFRA1P56159 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA1P56159 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA1P56159 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA1P56159 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.23■□□□□ 0.67
GFRA1P56159 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA1P56159 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.23■□□□□ 0.67
GFRA1P56159 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
GFRA1P56159 AC137761.2-201ENST00000561729 223 ntBASIC19.23■□□□□ 0.67
GFRA1P56159 AC145350.3-201ENST00000569033 163 ntBASIC19.23■□□□□ 0.67
GFRA1P56159 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA1P56159 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GFRA1P56159 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA1P56159 AC233723.2-201ENST00000623798 2106 ntBASIC19.22■□□□□ 0.67
GFRA1P56159 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
GFRA1P56159 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.22■□□□□ 0.67
GFRA1P56159 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.22■□□□□ 0.67
GFRA1P56159 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.22■□□□□ 0.67
GFRA1P56159 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.22■□□□□ 0.67
GFRA1P56159 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA1P56159 AC242852.2-201ENST00000615738 1807 ntBASIC19.22■□□□□ 0.67
GFRA1P56159 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.22■□□□□ 0.67
GFRA1P56159 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GFRA1P56159 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GFRA1P56159 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
GFRA1P56159 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA1P56159 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA1P56159 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GFRA1P56159 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GFRA1P56159 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.21■□□□□ 0.67
GFRA1P56159 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.21■□□□□ 0.67
GFRA1P56159 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
GFRA1P56159 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GFRA1P56159 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GFRA1P56159 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA1P56159 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA1P56159 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.2■□□□□ 0.66
GFRA1P56159 EEF1DP3-203ENST00000566025 782 ntBASIC19.2■□□□□ 0.66
GFRA1P56159 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.2■□□□□ 0.66
GFRA1P56159 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA1P56159 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA1P56159 GUSBP5-202ENST00000510805 1989 ntBASIC19.2■□□□□ 0.66
GFRA1P56159 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA1P56159 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA1P56159 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GFRA1P56159 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA1P56159 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GFRA1P56159 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA1P56159 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA1P56159 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA1P56159 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA1P56159 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA1P56159 AC004911.1-201ENST00000416316 871 ntBASIC19.19■□□□□ 0.66
GFRA1P56159 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.19■□□□□ 0.66
GFRA1P56159 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GFRA1P56159 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.19■□□□□ 0.66
GFRA1P56159 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms