Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 RRP14YKL082C 1305 nt3.7□□□□□ -1.82
RPT4P53549 YPR148CYPR148C 1308 nt3.7□□□□□ -1.82
RPT4P53549 YKL050CYKL050C 2769 nt3.69□□□□□ -1.82
RPT4P53549 DAN4YJR151C 3486 nt3.69□□□□□ -1.82
RPT4P53549 GYP6YJL044C 1377 nt3.69□□□□□ -1.82
RPT4P53549 FAA2YER015W 2235 nt3.69□□□□□ -1.82
RPT4P53549 PRP11YDL043C 801 nt3.69□□□□□ -1.82
RPT4P53549 RPL35BYDL136W 363 nt3.69□□□□□ -1.82
RPT4P53549 PPH3YDR075W 927 nt3.69□□□□□ -1.82
RPT4P53549 FMP10YER182W 735 nt3.69□□□□□ -1.82
RPT4P53549 YIL102C-AYIL102C-A 228 nt3.69□□□□□ -1.82
RPT4P53549 YJR071WYJR071W 369 nt3.69□□□□□ -1.82
RPT4P53549 YNL171CYNL171C 369 nt3.69□□□□□ -1.82
RPT4P53549 REX4YOL080C 870 nt3.69□□□□□ -1.82
RPT4P53549 STU2YLR045C 2667 nt3.69□□□□□ -1.82
RPT4P53549 YOR365CYOR365C 2112 nt3.68□□□□□ -1.82
RPT4P53549 DAP2YHR028C 2457 nt3.68□□□□□ -1.82
RPT4P53549 IMH1YLR309C 2736 nt3.68□□□□□ -1.82
RPT4P53549 VAS1YGR094W 3315 nt3.68□□□□□ -1.82
RPT4P53549 UBP5YER144C 2418 nt3.68□□□□□ -1.82
RPT4P53549 BSC2YDR275W 708 nt3.68□□□□□ -1.82
RPT4P53549 TDA8YAL064C-A 381 nt3.68□□□□□ -1.82
RPT4P53549 ATG29YPL166W 642 nt3.68□□□□□ -1.82
RPT4P53549 GPI10YGL142C 1851 nt3.68□□□□□ -1.82
RPT4P53549 MET10YFR030W 3108 nt3.67□□□□□ -1.82
RPT4P53549 PSF1YDR013W 627 nt3.67□□□□□ -1.82
RPT4P53549 BMH2YDR099W 822 nt3.67□□□□□ -1.82
RPT4P53549 YJR056CYJR056C 711 nt3.67□□□□□ -1.82
RPT4P53549 IES3YLR052W 753 nt3.67□□□□□ -1.82
RPT4P53549 TEM1YML064C 738 nt3.67□□□□□ -1.82
RPT4P53549 RRG9YNL213C 645 nt3.67□□□□□ -1.82
RPT4P53549 RUF5-1RUF5-1 710 nt3.67□□□□□ -1.82
RPT4P53549 COS1YNL336W 1146 nt3.67□□□□□ -1.82
RPT4P53549 RUF5-2RUF5-2 710 nt3.67□□□□□ -1.82
RPT4P53549 YOL118CYOL118C 309 nt3.67□□□□□ -1.82
RPT4P53549 CAF20YOR276W 486 nt3.67□□□□□ -1.82
RPT4P53549 TFB6YOR352W 1032 nt3.67□□□□□ -1.82
RPT4P53549 POL3YDL102W 3294 nt3.67□□□□□ -1.82
RPT4P53549 RPN2YIL075C 2838 nt3.66□□□□□ -1.82
RPT4P53549 FUN12YAL035W 3009 nt3.66□□□□□ -1.82
RPT4P53549 YOR296WYOR296W 3870 nt3.66□□□□□ -1.82
RPT4P53549 CET1YPL228W 1650 nt3.66□□□□□ -1.82
RPT4P53549 YPL109CYPL109C 1974 nt3.66□□□□□ -1.82
RPT4P53549 YDR124WYDR124W 975 nt3.66□□□□□ -1.82
RPT4P53549 tQ(UUG)BtQ(UUG)B 72 nt3.66□□□□□ -1.82
RPT4P53549 YPT35YHR105W 645 nt3.66□□□□□ -1.82
RPT4P53549 YIL156W-AYIL156W-A 402 nt3.66□□□□□ -1.82
RPT4P53549 IRC18YJL037W 675 nt3.66□□□□□ -1.82
RPT4P53549 COX14YML129C 213 nt3.66□□□□□ -1.82
RPT4P53549 TPK2YPL203W 1143 nt3.66□□□□□ -1.82
RPT4P53549 TAF6YGL112C 1551 nt3.66□□□□□ -1.82
RPT4P53549 SEC59YMR013C 1560 nt3.66□□□□□ -1.82
RPT4P53549 PRM15YMR278W 1869 nt3.66□□□□□ -1.82
RPT4P53549 MSS4YDR208W 2340 nt3.66□□□□□ -1.82
RPT4P53549 MAL12YGR292W 1755 nt3.66□□□□□ -1.82
RPT4P53549 MAL32YBR299W 1755 nt3.66□□□□□ -1.82
RPT4P53549 OAF3YKR064W 2592 nt3.65□□□□□ -1.82
RPT4P53549 EMC1YCL045C 2283 nt3.65□□□□□ -1.82
RPT4P53549 YOL019WYOL019W 1656 nt3.65□□□□□ -1.82
RPT4P53549 CDC40YDR364C 1368 nt3.65□□□□□ -1.82
RPT4P53549 YIG1YPL201C 1386 nt3.65□□□□□ -1.82
RPT4P53549 DBP3YGL078C 1572 nt3.65□□□□□ -1.82
RPT4P53549 ORC4YPR162C 1590 nt3.65□□□□□ -1.82
RPT4P53549 YHR022CYHR022C 771 nt3.65□□□□□ -1.83
RPT4P53549 YML090WYML090W 387 nt3.65□□□□□ -1.83
RPT4P53549 YMR087WYMR087W 855 nt3.65□□□□□ -1.83
RPT4P53549 SHH3YMR118C 591 nt3.65□□□□□ -1.83
RPT4P53549 SUR1YPL057C 1149 nt3.65□□□□□ -1.83
RPT4P53549 CTM1YHR109W 1758 nt3.65□□□□□ -1.83
RPT4P53549 IOC2YLR095C 2439 nt3.65□□□□□ -1.83
RPT4P53549 YDL176WYDL176W 2127 nt3.65□□□□□ -1.83
RPT4P53549 YME2YMR302C 2553 nt3.64□□□□□ -1.83
RPT4P53549 ALG1YBR110W 1350 nt3.64□□□□□ -1.83
RPT4P53549 YHR080CYHR080C 4038 nt3.64□□□□□ -1.83
RPT4P53549 NHP10YDL002C 612 nt3.64□□□□□ -1.83
RPT4P53549 IZH1YDR492W 951 nt3.64□□□□□ -1.83
RPT4P53549 YKL162CYKL162C 1209 nt3.64□□□□□ -1.83
RPT4P53549 GAB1YLR459W 1185 nt3.64□□□□□ -1.83
RPT4P53549 PNG1YPL096W 1092 nt3.64□□□□□ -1.83
RPT4P53549 CUE3YGL110C 1875 nt3.64□□□□□ -1.83
RPT4P53549 CIN8YEL061C 3003 nt3.64□□□□□ -1.83
RPT4P53549 IMD4YML056C 1575 nt3.63□□□□□ -1.83
RPT4P53549 NRP1YDL167C 2160 nt3.63□□□□□ -1.83
RPT4P53549 YPP1YGR198W 2454 nt3.63□□□□□ -1.83
RPT4P53549 YCR016WYCR016W 873 nt3.63□□□□□ -1.83
RPT4P53549 WBP1YEL002C 1293 nt3.63□□□□□ -1.83
RPT4P53549 HMF1YER057C 390 nt3.63□□□□□ -1.83
RPT4P53549 PPX1YHR201C 1194 nt3.63□□□□□ -1.83
RPT4P53549 BMT5YIL096C 1011 nt3.63□□□□□ -1.83
RPT4P53549 FIP1YJR093C 984 nt3.63□□□□□ -1.83
RPT4P53549 YNL035CYNL035C 1170 nt3.63□□□□□ -1.83
RPT4P53549 YOR082CYOR082C 342 nt3.63□□□□□ -1.83
RPT4P53549 VAM3YOR106W 852 nt3.63□□□□□ -1.83
RPT4P53549 ATG5YPL149W 885 nt3.63□□□□□ -1.83
RPT4P53549 RRP7YCL031C 894 nt3.63□□□□□ -1.83
RPT4P53549 NEM1YHR004C 1341 nt3.63□□□□□ -1.83
RPT4P53549 TSR1YDL060W 2367 nt3.62□□□□□ -1.83
RPT4P53549 MNL1YHR204W 2391 nt3.62□□□□□ -1.83
RPT4P53549 SMI1YGR229C 1518 nt3.62□□□□□ -1.83
RPT4P53549 YDR355CYDR355C 303 nt3.62□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms