Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC1A6P48664 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC1A6P48664 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC1A6P48664 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC1A6P48664 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC1A6P48664 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC1A6P48664 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC1A6P48664 AC010997.5-201ENST00000609182 354 ntBASIC21.02■□□□□ 0.96
SLC1A6P48664 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC1A6P48664 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC1A6P48664 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC1A6P48664 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SLC1A6P48664 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC1A6P48664 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SLC1A6P48664 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC1A6P48664 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SLC1A6P48664 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC1A6P48664 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A6P48664 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A6P48664 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.01■□□□□ 0.95
SLC1A6P48664 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A6P48664 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A6P48664 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC1A6P48664 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC1A6P48664 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A6P48664 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC1A6P48664 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21■□□□□ 0.95
SLC1A6P48664 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21■□□□□ 0.95
SLC1A6P48664 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A6P48664 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC1A6P48664 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21■□□□□ 0.95
SLC1A6P48664 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21■□□□□ 0.95
SLC1A6P48664 Z92544.1-202ENST00000571933 1220 ntBASIC21■□□□□ 0.95
SLC1A6P48664 MIR4787-201ENST00000607364 84 ntBASIC21■□□□□ 0.95
SLC1A6P48664 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SLC1A6P48664 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21■□□□□ 0.95
SLC1A6P48664 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A6P48664 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21■□□□□ 0.95
SLC1A6P48664 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A6P48664 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21■□□□□ 0.95
SLC1A6P48664 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC1A6P48664 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC1A6P48664 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC1A6P48664 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 AC133637.1-201ENST00000624115 1537 ntBASIC20.99■□□□□ 0.95
SLC1A6P48664 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
SLC1A6P48664 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 AL451085.2-201ENST00000605085 799 ntBASIC20.99■□□□□ 0.95
SLC1A6P48664 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC1A6P48664 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SLC1A6P48664 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC1A6P48664 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SLC1A6P48664 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC1A6P48664 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC1A6P48664 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
SLC1A6P48664 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC1A6P48664 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A6P48664 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A6P48664 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A6P48664 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A6P48664 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SLC1A6P48664 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A6P48664 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC1A6P48664 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC1A6P48664 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
SLC1A6P48664 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC1A6P48664 AL117332.1-201ENST00000622628 974 ntBASIC20.97■□□□□ 0.95
SLC1A6P48664 AC241377.3-202ENST00000626088 1088 ntBASIC20.97■□□□□ 0.95
SLC1A6P48664 AC241585.3-202ENST00000628937 1088 ntBASIC20.97■□□□□ 0.95
SLC1A6P48664 AC245100.8-202ENST00000629247 1058 ntBASIC20.97■□□□□ 0.95
SLC1A6P48664 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SLC1A6P48664 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC1A6P48664 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC1A6P48664 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A6P48664 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC1A6P48664 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms