Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 JJJ1YNL227C 1773 nt2.62□□□□□ -1.99
CUP9P41817 RDI1YDL135C 609 nt2.62□□□□□ -1.99
CUP9P41817 YDL242WYDL242W 354 nt2.62□□□□□ -1.99
CUP9P41817 PEX10YDR265W 1014 nt2.62□□□□□ -1.99
CUP9P41817 YHP1YDR451C 1062 nt2.62□□□□□ -1.99
CUP9P41817 YIM2YMR151W 438 nt2.62□□□□□ -1.99
CUP9P41817 YPR050CYPR050C 414 nt2.62□□□□□ -1.99
CUP9P41817 YPR150WYPR150W 522 nt2.62□□□□□ -1.99
CUP9P41817 KAP104YBR017C 2757 nt2.62□□□□□ -1.99
CUP9P41817 PRM15YMR278W 1869 nt2.62□□□□□ -1.99
CUP9P41817 ULP1YPL020C 1866 nt2.62□□□□□ -1.99
CUP9P41817 YDR098C-BYDR098C-B 5268 nt2.62□□□□□ -1.99
CUP9P41817 YDR210C-DYDR210C-D 5268 nt2.62□□□□□ -1.99
CUP9P41817 YDR316W-BYDR316W-B 5268 nt2.62□□□□□ -1.99
CUP9P41817 YDR365W-BYDR365W-B 5268 nt2.62□□□□□ -1.99
CUP9P41817 YER138CYER138C 5268 nt2.62□□□□□ -1.99
CUP9P41817 YER160CYER160C 5268 nt2.62□□□□□ -1.99
CUP9P41817 YGR038C-BYGR038C-B 5268 nt2.62□□□□□ -1.99
CUP9P41817 YGR161C-DYGR161C-D 5268 nt2.62□□□□□ -1.99
CUP9P41817 YJR027WYJR027W 5268 nt2.62□□□□□ -1.99
CUP9P41817 YLR157C-BYLR157C-B 5268 nt2.62□□□□□ -1.99
CUP9P41817 YML039WYML039W 5268 nt2.62□□□□□ -1.99
CUP9P41817 YML045WYML045W 5268 nt2.62□□□□□ -1.99
CUP9P41817 YMR050CYMR050C 5268 nt2.62□□□□□ -1.99
CUP9P41817 YOL103W-BYOL103W-B 5268 nt2.62□□□□□ -1.99
CUP9P41817 YBR012W-BYBR012W-B 5271 nt2.62□□□□□ -1.99
CUP9P41817 YOR142W-BYOR142W-B 5268 nt2.62□□□□□ -1.99
CUP9P41817 YPL257W-BYPL257W-B 5268 nt2.62□□□□□ -1.99
CUP9P41817 YPR158W-BYPR158W-B 5271 nt2.62□□□□□ -1.99
CUP9P41817 TDA3YHR009C 1572 nt2.61□□□□□ -1.99
CUP9P41817 ENA5YDR038C 3276 nt2.61□□□□□ -1.99
CUP9P41817 MAK21YDR060W 3078 nt2.61□□□□□ -1.99
CUP9P41817 RAD5YLR032W 3510 nt2.61□□□□□ -1.99
CUP9P41817 VPS33YLR396C 2076 nt2.61□□□□□ -1.99
CUP9P41817 VPS17YOR132W 1656 nt2.61□□□□□ -1.99
CUP9P41817 RPC11YDR045C 333 nt2.61□□□□□ -1.99
CUP9P41817 YFL041W-AYFL041W-A 192 nt2.61□□□□□ -1.99
CUP9P41817 SDT1YGL224C 843 nt2.61□□□□□ -1.99
CUP9P41817 ARC15YIL062C 465 nt2.61□□□□□ -1.99
CUP9P41817 YVH1YIR026C 1095 nt2.61□□□□□ -1.99
CUP9P41817 YAL031W-AYAL031W-A 309 nt2.61□□□□□ -1.99
CUP9P41817 SDH3YKL141W 597 nt2.61□□□□□ -1.99
CUP9P41817 YLR326WYLR326W 723 nt2.61□□□□□ -1.99
CUP9P41817 YMR141CYMR141C 309 nt2.61□□□□□ -1.99
CUP9P41817 TMA16YOR252W 537 nt2.61□□□□□ -1.99
CUP9P41817 CNS1YBR155W 1158 nt2.61□□□□□ -1.99
CUP9P41817 NAB6YML117W 3405 nt2.61□□□□□ -1.99
CUP9P41817 ILS1YBL076C 3219 nt2.61□□□□□ -1.99
CUP9P41817 IOC3YFR013W 2364 nt2.61□□□□□ -1.99
CUP9P41817 YIL169CYIL169C 2988 nt2.61□□□□□ -1.99
CUP9P41817 YDR089WYDR089W 2610 nt2.6□□□□□ -1.99
CUP9P41817 RRM3YHR031C 2172 nt2.6□□□□□ -1.99
CUP9P41817 ERP6YGL002W 651 nt2.6□□□□□ -1.99
CUP9P41817 YIL086CYIL086C 309 nt2.6□□□□□ -1.99
CUP9P41817 MTR2YKL186C 555 nt2.6□□□□□ -1.99
CUP9P41817 OST6YML019W 999 nt2.6□□□□□ -1.99
CUP9P41817 NDJ1YOL104C 1059 nt2.6□□□□□ -1.99
CUP9P41817 FES1YBR101C 873 nt2.6□□□□□ -1.99
CUP9P41817 BPT1YLL015W 4680 nt2.6□□□□□ -1.99
CUP9P41817 COM2YER130C 1332 nt2.6□□□□□ -1.99
CUP9P41817 GCD6YDR211W 2139 nt2.6□□□□□ -1.99
CUP9P41817 GAT2YMR136W 1683 nt2.6□□□□□ -1.99
CUP9P41817 TFC1YBR123C 1950 nt2.6□□□□□ -1.99
CUP9P41817 DAP2YHR028C 2457 nt2.59□□□□□ -1.99
CUP9P41817 MIX14YDR031W 366 nt2.59□□□□□ -1.99
CUP9P41817 BET1YIL004C 429 nt2.59□□□□□ -1.99
CUP9P41817 YKL177WYKL177W 339 nt2.59□□□□□ -1.99
CUP9P41817 SAM37YMR060C 984 nt2.59□□□□□ -1.99
CUP9P41817 MCM16YPR046W 546 nt2.59□□□□□ -1.99
CUP9P41817 PRE2YPR103W 864 nt2.59□□□□□ -1.99
CUP9P41817 NMD2YHR077C 3270 nt2.59□□□□□ -1.99
CUP9P41817 ISM1YPL040C 3009 nt2.59□□□□□ -2
CUP9P41817 MIG1YGL035C 1515 nt2.58□□□□□ -2
CUP9P41817 STP2YHR006W 1626 nt2.58□□□□□ -2
CUP9P41817 snR70snR70 164 nt2.58□□□□□ -2
CUP9P41817 FRQ1YDR373W 573 nt2.58□□□□□ -2
CUP9P41817 WBP1YEL002C 1293 nt2.58□□□□□ -2
CUP9P41817 AST2YER101C 1293 nt2.58□□□□□ -2
CUP9P41817 SCM4YGR049W 564 nt2.58□□□□□ -2
CUP9P41817 QCR10YHR001W-A 234 nt2.58□□□□□ -2
CUP9P41817 YJL028WYJL028W 336 nt2.58□□□□□ -2
CUP9P41817 PHD1YKL043W 1101 nt2.58□□□□□ -2
CUP9P41817 LTO1YNL260C 597 nt2.58□□□□□ -2
CUP9P41817 DIM1YPL266W 957 nt2.58□□□□□ -2
CUP9P41817 YPR136CYPR136C 513 nt2.58□□□□□ -2
CUP9P41817 DSN1YIR010W 1731 nt2.58□□□□□ -2
CUP9P41817 MAL12YGR292W 1755 nt2.58□□□□□ -2
CUP9P41817 MAL32YBR299W 1755 nt2.58□□□□□ -2
CUP9P41817 GYP6YJL044C 1377 nt2.58□□□□□ -2
CUP9P41817 PHO5YBR093C 1404 nt2.58□□□□□ -2
CUP9P41817 POL31YJR006W 1464 nt2.58□□□□□ -2
CUP9P41817 FAR1YJL157C 2493 nt2.58□□□□□ -2
CUP9P41817 SDS23YGL056C 1584 nt2.57□□□□□ -2
CUP9P41817 VPS64YDR200C 1815 nt2.57□□□□□ -2
CUP9P41817 LCB4YOR171C 1875 nt2.57□□□□□ -2
CUP9P41817 YER165C-AYER165C-A 357 nt2.57□□□□□ -2
CUP9P41817 TOS8YGL096W 831 nt2.57□□□□□ -2
CUP9P41817 DOG1YHR044C 741 nt2.57□□□□□ -2
CUP9P41817 DAL2YIR029W 1032 nt2.57□□□□□ -2
CUP9P41817 YJR111CYJR111C 852 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 29.2 ms