Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.3■□□□□ 0.84
RPL3P39023 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPL3P39023 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RPL3P39023 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPL3P39023 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPL3P39023 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPL3P39023 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPL3P39023 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.3■□□□□ 0.84
RPL3P39023 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPL3P39023 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPL3P39023 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPL3P39023 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RPL3P39023 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPL3P39023 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPL3P39023 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.29■□□□□ 0.84
RPL3P39023 BX842568.3-201ENST00000418104 571 ntBASIC20.29■□□□□ 0.84
RPL3P39023 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.29■□□□□ 0.84
RPL3P39023 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.29■□□□□ 0.84
RPL3P39023 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.29■□□□□ 0.84
RPL3P39023 Z98882.1-201ENST00000622160 2253 ntBASIC20.29■□□□□ 0.84
RPL3P39023 AP004607.7-201ENST00000527152 1677 ntBASIC20.29■□□□□ 0.84
RPL3P39023 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.28■□□□□ 0.84
RPL3P39023 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RPL3P39023 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.28■□□□□ 0.84
RPL3P39023 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.28■□□□□ 0.84
RPL3P39023 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.28■□□□□ 0.84
RPL3P39023 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.28■□□□□ 0.84
RPL3P39023 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.28■□□□□ 0.84
RPL3P39023 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.28■□□□□ 0.84
RPL3P39023 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RPL3P39023 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPL3P39023 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
RPL3P39023 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.28■□□□□ 0.84
RPL3P39023 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL3P39023 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL3P39023 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL3P39023 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RPL3P39023 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RPL3P39023 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL3P39023 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL3P39023 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL3P39023 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.27■□□□□ 0.84
RPL3P39023 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL3P39023 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPL3P39023 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPL3P39023 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPL3P39023 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.26■□□□□ 0.83
RPL3P39023 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RPL3P39023 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.26■□□□□ 0.83
RPL3P39023 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RPL3P39023 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.26■□□□□ 0.83
RPL3P39023 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RPL3P39023 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.26■□□□□ 0.83
RPL3P39023 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.26■□□□□ 0.83
RPL3P39023 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPL3P39023 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.25■□□□□ 0.83
RPL3P39023 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPL3P39023 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.25■□□□□ 0.83
RPL3P39023 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPL3P39023 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.25■□□□□ 0.83
RPL3P39023 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.25■□□□□ 0.83
RPL3P39023 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.25■□□□□ 0.83
RPL3P39023 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.25■□□□□ 0.83
RPL3P39023 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.25■□□□□ 0.83
RPL3P39023 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RPL3P39023 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.25■□□□□ 0.83
RPL3P39023 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPL3P39023 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPL3P39023 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPL3P39023 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPL3P39023 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
RPL3P39023 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.24■□□□□ 0.83
RPL3P39023 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
RPL3P39023 AC026471.6-201ENST00000622954 1905 ntBASIC20.24■□□□□ 0.83
RPL3P39023 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPL3P39023 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms