Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 HSX1tR(CCU)J 72 nt4.79□□□□□ -1.64
PUB1P32588 SDL1YIL167W 633 nt4.79□□□□□ -1.64
PUB1P32588 YKT6YKL196C 603 nt4.79□□□□□ -1.64
PUB1P32588 AIM29YKR074W 468 nt4.79□□□□□ -1.64
PUB1P32588 FOL3YMR113W 1284 nt4.79□□□□□ -1.64
PUB1P32588 YNL235CYNL235C 432 nt4.79□□□□□ -1.64
PUB1P32588 YOR186WYOR186W 435 nt4.79□□□□□ -1.64
PUB1P32588 YRO2YBR054W 1035 nt4.79□□□□□ -1.64 RIP-Chip
PUB1P32588 RIM15YFL033C 5313 nt4.79□□□□□ -1.64
PUB1P32588 PRT1YOR361C 2292 nt4.79□□□□□ -1.64
PUB1P32588 ULA1YPL003W 1389 nt4.78□□□□□ -1.64 RIP-Chip
PUB1P32588 APN2YBL019W 1563 nt4.78□□□□□ -1.64
PUB1P32588 YJR098CYJR098C 1971 nt4.78□□□□□ -1.64
PUB1P32588 PPR1YLR014C 2715 nt4.78□□□□□ -1.64
PUB1P32588 YDL034WYDL034W 345 nt4.78□□□□□ -1.64
PUB1P32588 GRX2YDR513W 432 nt4.78□□□□□ -1.64 RIP-Chip
PUB1P32588 ERP1YAR002C-A 660 nt4.78□□□□□ -1.64
PUB1P32588 ERD2YBL040C 660 nt4.78□□□□□ -1.64 RIP-Chip
PUB1P32588 YPR010C-AYPR010C-A 219 nt4.78□□□□□ -1.64
PUB1P32588 OXP1YKL215C 3861 nt4.78□□□□□ -1.64
PUB1P32588 FRE3YOR381W 2136 nt4.78□□□□□ -1.64
PUB1P32588 PPN1YDR452W 2025 nt4.77□□□□□ -1.65
PUB1P32588 CRZ1YNL027W 2037 nt4.77□□□□□ -1.65
PUB1P32588 NUP1YOR098C 3231 nt4.77□□□□□ -1.65
PUB1P32588 POL31YJR006W 1464 nt4.77□□□□□ -1.65
PUB1P32588 PRP45YAL032C 1140 nt4.77□□□□□ -1.65
PUB1P32588 CKA2YOR061W 1020 nt4.77□□□□□ -1.65
PUB1P32588 STR2YJR130C 1920 nt4.77□□□□□ -1.65
PUB1P32588 YOR1YGR281W 4434 nt4.77□□□□□ -1.65 RIP-Chip
PUB1P32588 TSR1YDL060W 2367 nt4.77□□□□□ -1.65
PUB1P32588 BUD27YFL023W 2391 nt4.76□□□□□ -1.65
PUB1P32588 YDR413CYDR413C 576 nt4.76□□□□□ -1.65
PUB1P32588 SCW4YGR279C 1161 nt4.76□□□□□ -1.65 RIP-Chip
PUB1P32588 YHR050W-AYHR050W-A 171 nt4.76□□□□□ -1.65
PUB1P32588 MAK16YAL025C 921 nt4.76□□□□□ -1.65
PUB1P32588 BNA1YJR025C 534 nt4.76□□□□□ -1.65 RIP-Chip
PUB1P32588 UBA1YKL210W 3075 nt4.76□□□□□ -1.65
PUB1P32588 YCT1YLL055W 1596 nt4.76□□□□□ -1.65 RIP-Chip
PUB1P32588 UNG1YML021C 1080 nt4.76□□□□□ -1.65
PUB1P32588 CTK3YML112W 891 nt4.76□□□□□ -1.65
PUB1P32588 ISU2YOR226C 471 nt4.76□□□□□ -1.65
PUB1P32588 CTS1YLR286C 1689 nt4.76□□□□□ -1.65 RIP-Chip
PUB1P32588 YKL075CYKL075C 1353 nt4.76□□□□□ -1.65
PUB1P32588 PUS1YPL212C 1635 nt4.75□□□□□ -1.65
PUB1P32588 PKP2YGL059W 1476 nt4.75□□□□□ -1.65
PUB1P32588 NAM9YNL137C 1461 nt4.75□□□□□ -1.65 RIP-Chip
PUB1P32588 RFT1YBL020W 1725 nt4.75□□□□□ -1.65 RIP-Chip
PUB1P32588 DPP1YDR284C 870 nt4.75□□□□□ -1.65 RIP-Chip
PUB1P32588 RNH203YLR154C 333 nt4.75□□□□□ -1.65
PUB1P32588 COQ5YML110C 924 nt4.75□□□□□ -1.65
PUB1P32588 RPL13BYMR142C 600 nt4.75□□□□□ -1.65 RIP-Chip
PUB1P32588 YPL035CYPL035C 348 nt4.75□□□□□ -1.65
PUB1P32588 NAT3YPR131C 588 nt4.75□□□□□ -1.65
PUB1P32588 MAL11YGR289C 1851 nt4.75□□□□□ -1.65
PUB1P32588 SAT4YCR008W 1812 nt4.74□□□□□ -1.65
PUB1P32588 ARP9YMR033W 1404 nt4.74□□□□□ -1.65
PUB1P32588 YCR097W-AYCR097W-A 267 nt4.74□□□□□ -1.65
PUB1P32588 FMN1YDR236C 657 nt4.74□□□□□ -1.65 RIP-Chip
PUB1P32588 YJL119CYJL119C 324 nt4.74□□□□□ -1.65
PUB1P32588 AHP1YLR109W 531 nt4.74□□□□□ -1.65
PUB1P32588 YMR304C-AYMR304C-A 351 nt4.74□□□□□ -1.65
PUB1P32588 CMR3YPR013C 954 nt4.74□□□□□ -1.65
PUB1P32588 YBR209WYBR209W 318 nt4.74□□□□□ -1.65
PUB1P32588 YCL021W-AYCL021W-A 378 nt4.74□□□□□ -1.65 RIP-Chip
PUB1P32588 SSL1YLR005W 1386 nt4.74□□□□□ -1.65
PUB1P32588 SPH1YLR313C 1593 nt4.74□□□□□ -1.65
PUB1P32588 CST6YIL036W 1764 nt4.73□□□□□ -1.65
PUB1P32588 RGP1YDR137W 1992 nt4.73□□□□□ -1.65
PUB1P32588 RNR3YIL066C 2610 nt4.73□□□□□ -1.65
PUB1P32588 PBP4YDL053C 558 nt4.73□□□□□ -1.65 RIP-Chip
PUB1P32588 YPR050CYPR050C 414 nt4.73□□□□□ -1.65
PUB1P32588 YBR196C-BYBR196C-B 105 nt4.73□□□□□ -1.65
PUB1P32588 SWT1YOR166C 1377 nt4.73□□□□□ -1.65
PUB1P32588 IMA2YOL157C 1770 nt4.73□□□□□ -1.65
PUB1P32588 ASN1YPR145W 1719 nt4.72□□□□□ -1.65
PUB1P32588 ATG20YDL113C 1923 nt4.72□□□□□ -1.65
PUB1P32588 RMT2YDR465C 1239 nt4.72□□□□□ -1.65
PUB1P32588 YGR017WYGR017W 894 nt4.72□□□□□ -1.65
PUB1P32588 PDX1YGR193C 1233 nt4.72□□□□□ -1.65
PUB1P32588 DBP8YHR169W 1296 nt4.72□□□□□ -1.65
PUB1P32588 GON7YJL184W 372 nt4.72□□□□□ -1.65
PUB1P32588 YAR023CYAR023C 540 nt4.72□□□□□ -1.65
PUB1P32588 UPS2YLR168C 693 nt4.72□□□□□ -1.65
PUB1P32588 BSC3YLR465C 309 nt4.72□□□□□ -1.65 RIP-Chip
PUB1P32588 ATP18YML081C-A 180 nt4.72□□□□□ -1.65
PUB1P32588 PRX1YBL064C 786 nt4.72□□□□□ -1.65 RIP-Chip
PUB1P32588 YOR379CYOR379C 339 nt4.72□□□□□ -1.65
PUB1P32588 YBR090CYBR090C 369 nt4.72□□□□□ -1.65 RIP-Chip
PUB1P32588 PDI1YCL043C 1569 nt4.72□□□□□ -1.65
PUB1P32588 TMN2YDR107C 2019 nt4.72□□□□□ -1.65 RIP-Chip
PUB1P32588 APM2YHL019C 1818 nt4.72□□□□□ -1.65
PUB1P32588 KRE2YDR483W 1329 nt4.72□□□□□ -1.65 RIP-Chip
PUB1P32588 NEL1YHR035W 1893 nt4.71□□□□□ -1.66
PUB1P32588 SEO1YAL067C 1782 nt4.71□□□□□ -1.66
PUB1P32588 VBA1YMR088C 1689 nt4.71□□□□□ -1.66 RIP-Chip
PUB1P32588 MAK5YBR142W 2322 nt4.71□□□□□ -1.66
PUB1P32588 MRM2YGL136C 963 nt4.71□□□□□ -1.66
PUB1P32588 YHR007C-AYHR007C-A 216 nt4.71□□□□□ -1.66
PUB1P32588 COX8YLR395C 237 nt4.71□□□□□ -1.66 RIP-Chip
PUB1P32588 ASI2YNL159C 870 nt4.71□□□□□ -1.66 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms