Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC12P31275 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC12P31275 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC12P31275 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HOXC12P31275 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HOXC12P31275 AL034346.1-201ENST00000568244 1277 ntBASIC18.92■□□□□ 0.62
HOXC12P31275 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HOXC12P31275 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC12P31275 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HOXC12P31275 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
HOXC12P31275 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
HOXC12P31275 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC12P31275 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC12P31275 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HOXC12P31275 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
HOXC12P31275 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC12P31275 AC006015.1-201ENST00000429970 570 ntBASIC18.91■□□□□ 0.62
HOXC12P31275 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.91■□□□□ 0.62
HOXC12P31275 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.91■□□□□ 0.62
HOXC12P31275 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.91■□□□□ 0.62
HOXC12P31275 RAP2CP1-201ENST00000605103 478 ntBASIC18.91■□□□□ 0.62
HOXC12P31275 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HOXC12P31275 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC12P31275 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HOXC12P31275 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HOXC12P31275 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC12P31275 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC12P31275 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.9■□□□□ 0.62
HOXC12P31275 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HOXC12P31275 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC12P31275 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC12P31275 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC12P31275 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.9■□□□□ 0.62
HOXC12P31275 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HOXC12P31275 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC12P31275 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC12P31275 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HOXC12P31275 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
HOXC12P31275 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
HOXC12P31275 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
HOXC12P31275 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HOXC12P31275 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.89■□□□□ 0.61
HOXC12P31275 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HOXC12P31275 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC12P31275 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.89■□□□□ 0.61
HOXC12P31275 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.89■□□□□ 0.61
HOXC12P31275 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
HOXC12P31275 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HOXC12P31275 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC12P31275 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.89■□□□□ 0.61
HOXC12P31275 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HOXC12P31275 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC12P31275 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC12P31275 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXC12P31275 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC12P31275 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC12P31275 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 AC009237.3-201ENST00000393279 1427 ntBASIC18.88■□□□□ 0.61
HOXC12P31275 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 AC087742.1-201ENST00000575880 1738 ntBASIC18.88■□□□□ 0.61
HOXC12P31275 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC12P31275 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC12P31275 C9orf163-202ENST00000624034 2573 ntBASIC18.88■□□□□ 0.61
HOXC12P31275 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXC12P31275 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
HOXC12P31275 ABHD17AP1-201ENST00000358206 933 ntBASIC18.87■□□□□ 0.61
HOXC12P31275 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.87■□□□□ 0.61
HOXC12P31275 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXC12P31275 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HOXC12P31275 CDCA4P2-201ENST00000441182 718 ntBASIC18.87■□□□□ 0.61
HOXC12P31275 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC12P31275 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC12P31275 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXC12P31275 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXC12P31275 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXC12P31275 C1orf229-201ENST00000623686 2258 ntBASIC18.87■□□□□ 0.61
HOXC12P31275 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC12P31275 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HOXC12P31275 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC12P31275 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXC12P31275 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC12P31275 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC12P31275 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXC12P31275 AP004607.7-201ENST00000527152 1677 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms