Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DOBP13765 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DOBP13765 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DOBP13765 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DOBP13765 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DOBP13765 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.2■□□□□ 0.66
HLA-DOBP13765 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DOBP13765 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.2■□□□□ 0.66
HLA-DOBP13765 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DOBP13765 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DOBP13765 AC007375.3-201ENST00000600936 2314 ntBASIC19.19■□□□□ 0.66
HLA-DOBP13765 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
HLA-DOBP13765 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.19■□□□□ 0.66
HLA-DOBP13765 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DOBP13765 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DOBP13765 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DOBP13765 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DOBP13765 AC005837.3-201ENST00000612163 286 ntBASIC19.19■□□□□ 0.66
HLA-DOBP13765 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DOBP13765 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DOBP13765 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DOBP13765 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HLA-DOBP13765 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLA-DOBP13765 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
HLA-DOBP13765 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DOBP13765 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
HLA-DOBP13765 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DOBP13765 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DOBP13765 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DOBP13765 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HLA-DOBP13765 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DOBP13765 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.18■□□□□ 0.66
HLA-DOBP13765 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DOBP13765 AC142381.2-201ENST00000566120 298 ntBASIC19.18■□□□□ 0.66
HLA-DOBP13765 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DOBP13765 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DOBP13765 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.18■□□□□ 0.66
HLA-DOBP13765 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLA-DOBP13765 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DOBP13765 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HLA-DOBP13765 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DOBP13765 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DOBP13765 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DOBP13765 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DOBP13765 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DOBP13765 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DOBP13765 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
HLA-DOBP13765 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DOBP13765 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.17■□□□□ 0.66
HLA-DOBP13765 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLA-DOBP13765 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.17■□□□□ 0.66
HLA-DOBP13765 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DOBP13765 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DOBP13765 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DOBP13765 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DOBP13765 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOBP13765 MIR638-201ENST00000385237 100 ntBASIC19.16■□□□□ 0.66
HLA-DOBP13765 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DOBP13765 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.16■□□□□ 0.66
HLA-DOBP13765 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.16■□□□□ 0.66
HLA-DOBP13765 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOBP13765 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOBP13765 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
HLA-DOBP13765 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLA-DOBP13765 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.15■□□□□ 0.66
HLA-DOBP13765 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DOBP13765 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.15■□□□□ 0.66
HLA-DOBP13765 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HLA-DOBP13765 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
HLA-DOBP13765 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HLA-DOBP13765 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOBP13765 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOBP13765 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 AC105233.4-201ENST00000642045 216 ntBASIC19.14■□□□□ 0.65
HLA-DOBP13765 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOBP13765 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOBP13765 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HLA-DOBP13765 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.14■□□□□ 0.65
HLA-DOBP13765 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.13■□□□□ 0.65
HLA-DOBP13765 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HLA-DOBP13765 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DOBP13765 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOBP13765 MIR572-201ENST00000384983 95 ntBASIC19.13■□□□□ 0.65
HLA-DOBP13765 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms