Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
UBL4AP11441 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.74■□□□□ 0.75
UBL4AP11441 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.74■□□□□ 0.75
UBL4AP11441 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
UBL4AP11441 AL136967.2-201ENST00000623968 743 ntBASIC19.74■□□□□ 0.75
UBL4AP11441 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBL4AP11441 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.74■□□□□ 0.75
UBL4AP11441 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.74■□□□□ 0.75
UBL4AP11441 FAM99A-202ENST00000538190 1989 ntBASIC19.74■□□□□ 0.75
UBL4AP11441 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
UBL4AP11441 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.73■□□□□ 0.75
UBL4AP11441 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
UBL4AP11441 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.73■□□□□ 0.75
UBL4AP11441 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 AL391422.3-201ENST00000603791 2761 ntBASIC19.73■□□□□ 0.75
UBL4AP11441 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.73■□□□□ 0.75
UBL4AP11441 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.73■□□□□ 0.75
UBL4AP11441 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBL4AP11441 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
UBL4AP11441 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.73■□□□□ 0.75
UBL4AP11441 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBL4AP11441 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBL4AP11441 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.72■□□□□ 0.75
UBL4AP11441 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBL4AP11441 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBL4AP11441 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBL4AP11441 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBL4AP11441 SUDS3P1-201ENST00000505831 966 ntBASIC19.72■□□□□ 0.75
UBL4AP11441 AC142381.2-201ENST00000566120 298 ntBASIC19.72■□□□□ 0.75
UBL4AP11441 AL034346.1-201ENST00000568244 1277 ntBASIC19.72■□□□□ 0.75
UBL4AP11441 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBL4AP11441 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBL4AP11441 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.71■□□□□ 0.75
UBL4AP11441 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.71■□□□□ 0.75
UBL4AP11441 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.71■□□□□ 0.75
UBL4AP11441 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
UBL4AP11441 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.71■□□□□ 0.75
UBL4AP11441 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.71■□□□□ 0.75
UBL4AP11441 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.71■□□□□ 0.75
UBL4AP11441 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.71■□□□□ 0.75
UBL4AP11441 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.71■□□□□ 0.75
UBL4AP11441 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.71■□□□□ 0.75
UBL4AP11441 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
UBL4AP11441 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
UBL4AP11441 AC092667.1-201ENST00000434301 2586 ntBASIC19.71■□□□□ 0.75
UBL4AP11441 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBL4AP11441 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBL4AP11441 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
UBL4AP11441 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBL4AP11441 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBL4AP11441 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
UBL4AP11441 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBL4AP11441 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBL4AP11441 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.7■□□□□ 0.74
UBL4AP11441 AF106564.1-201ENST00000607058 2553 ntBASIC19.7■□□□□ 0.74
UBL4AP11441 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBL4AP11441 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBL4AP11441 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.7■□□□□ 0.74
UBL4AP11441 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.69■□□□□ 0.74
UBL4AP11441 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBL4AP11441 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBL4AP11441 AP004607.7-201ENST00000527152 1677 ntBASIC19.69■□□□□ 0.74
UBL4AP11441 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.69■□□□□ 0.74
UBL4AP11441 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBL4AP11441 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.69■□□□□ 0.74
UBL4AP11441 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.69■□□□□ 0.74
UBL4AP11441 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBL4AP11441 SMUG1P1-201ENST00000590640 811 ntBASIC19.69■□□□□ 0.74
UBL4AP11441 AC005837.3-201ENST00000612163 286 ntBASIC19.69■□□□□ 0.74
UBL4AP11441 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.69■□□□□ 0.74
UBL4AP11441 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBL4AP11441 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms