Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PF4V1P10720 AC068473.5-201ENST00000616428 2072 ntBASIC16.92■□□□□ 0.3
PF4V1P10720 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PF4V1P10720 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PF4V1P10720 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.91■□□□□ 0.3
PF4V1P10720 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PF4V1P10720 AC016769.1-201ENST00000409132 1010 ntBASIC16.91■□□□□ 0.3
PF4V1P10720 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PF4V1P10720 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PF4V1P10720 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.91■□□□□ 0.3
PF4V1P10720 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PF4V1P10720 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PF4V1P10720 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PF4V1P10720 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.91■□□□□ 0.3
PF4V1P10720 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.91■□□□□ 0.3
PF4V1P10720 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PF4V1P10720 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.9■□□□□ 0.3
PF4V1P10720 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PF4V1P10720 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PF4V1P10720 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PF4V1P10720 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.9■□□□□ 0.3
PF4V1P10720 SMUG1P1-201ENST00000590640 811 ntBASIC16.9■□□□□ 0.3
PF4V1P10720 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.9■□□□□ 0.3
PF4V1P10720 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PF4V1P10720 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.9■□□□□ 0.3
PF4V1P10720 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PF4V1P10720 AC137767.1-201ENST00000602918 1920 ntBASIC16.9■□□□□ 0.3
PF4V1P10720 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PF4V1P10720 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PF4V1P10720 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PF4V1P10720 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.89■□□□□ 0.29
PF4V1P10720 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.89■□□□□ 0.29
PF4V1P10720 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.89■□□□□ 0.29
PF4V1P10720 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.89■□□□□ 0.29
PF4V1P10720 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.89■□□□□ 0.29
PF4V1P10720 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PF4V1P10720 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PF4V1P10720 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.88■□□□□ 0.29
PF4V1P10720 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.88■□□□□ 0.29
PF4V1P10720 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PF4V1P10720 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.88■□□□□ 0.29
PF4V1P10720 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.88■□□□□ 0.29
PF4V1P10720 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 AC092437.1-201ENST00000624794 1048 ntBASIC16.88■□□□□ 0.29
PF4V1P10720 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PF4V1P10720 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PF4V1P10720 AC139530.1-201ENST00000575312 1977 ntBASIC16.88■□□□□ 0.29
PF4V1P10720 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.87■□□□□ 0.29
PF4V1P10720 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.87■□□□□ 0.29
PF4V1P10720 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.87■□□□□ 0.29
PF4V1P10720 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PF4V1P10720 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PF4V1P10720 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 AC137761.2-201ENST00000561729 223 ntBASIC16.87■□□□□ 0.29
PF4V1P10720 AC145350.3-201ENST00000569033 163 ntBASIC16.87■□□□□ 0.29
PF4V1P10720 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PF4V1P10720 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PF4V1P10720 AC233723.2-201ENST00000623798 2106 ntBASIC16.87■□□□□ 0.29
PF4V1P10720 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.87■□□□□ 0.29
PF4V1P10720 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PF4V1P10720 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 BX005040.4-201ENST00000637145 1518 ntBASIC16.86■□□□□ 0.29
PF4V1P10720 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.86■□□□□ 0.29
PF4V1P10720 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PF4V1P10720 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.86■□□□□ 0.29
PF4V1P10720 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms