Protein–RNA interactions for Protein: P0CX66

TY1A-ER2, Transposon Ty1-ER2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER2P0CX66 tA(AGC)K2tA(AGC)K2 73 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 tA(AGC)LtA(AGC)L 73 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 tA(AGC)M1tA(AGC)M1 73 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 tA(AGC)M2tA(AGC)M2 73 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 tA(AGC)PtA(AGC)P 73 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 DPB4YDR121W 591 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 GLO2YDR272W 825 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 BSC2YDR275W 708 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 YEL008WYEL008W 381 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 CYC7YEL039C 342 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 VMA10YHR039C-A 345 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 YIR020C-BYIR020C-B 735 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 CDC42YLR229C 576 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 ICY1YMR195W 384 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 RMI1YPL024W 726 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 ESC8YOL017W 2145 nt5.86□□□□□ -1.47
TY1A-ER2P0CX66 TPO3YPR156C 1869 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 VAN1YML115C 1608 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 YBR139WYBR139W 1527 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 TRE1YPL176C 2352 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 MPC3YGR243W 441 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 ATG36YJL185C 882 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 RUF23RUF23 254 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 TOS6YNL300W 309 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 DGK1YOR311C 873 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 RPS6AYPL090C 711 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 YPR098CYPR098C 486 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 RPS6BYBR181C 711 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 DAL4YIR028W 1908 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 VHT1YGR065C 1782 nt5.85□□□□□ -1.47
TY1A-ER2P0CX66 ASF2YDL197C 1578 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 MSS1YMR023C 1581 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 ATP2YJR121W 1536 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 ZPR1YGR211W 1461 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 CUE3YGL110C 1875 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 SIA1YOR137C 1869 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 AIM3YBR108W 2844 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 API2YDR525W 330 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 ECO1YFR027W 846 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 YGL188C-AYGL188C-A 141 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 NBL1YHR199C-A 222 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 COA1YIL157C 594 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 YJR012CYJR012C 624 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 CYC3YAL039C 810 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 YLR157W-EYLR157W-E 165 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 YOR331CYOR331C 558 nt5.84□□□□□ -1.47
TY1A-ER2P0CX66 GIP1YBR045C 1920 nt5.84□□□□□ -1.48
TY1A-ER2P0CX66 SIS2YKR072C 1689 nt5.83□□□□□ -1.48
TY1A-ER2P0CX66 YCR007CYCR007C 720 nt5.83□□□□□ -1.48
TY1A-ER2P0CX66 YDR102CYDR102C 333 nt5.83□□□□□ -1.48
TY1A-ER2P0CX66 YJL144WYJL144W 315 nt5.83□□□□□ -1.48
TY1A-ER2P0CX66 MRPL38YKL170W 417 nt5.83□□□□□ -1.48
TY1A-ER2P0CX66 ERG3YLR056W 1098 nt5.83□□□□□ -1.48
TY1A-ER2P0CX66 PFK2YMR205C 2880 nt5.83□□□□□ -1.48
TY1A-ER2P0CX66 YNR063WYNR063W 1824 nt5.83□□□□□ -1.48
TY1A-ER2P0CX66 TOG1YER184C 2385 nt5.82□□□□□ -1.48
TY1A-ER2P0CX66 CDC36YDL165W 576 nt5.82□□□□□ -1.48
TY1A-ER2P0CX66 YHL048C-AYHL048C-A 135 nt5.82□□□□□ -1.48
TY1A-ER2P0CX66 CBR1YIL043C 855 nt5.82□□□□□ -1.48
TY1A-ER2P0CX66 SUE1YPR151C 621 nt5.82□□□□□ -1.48
TY1A-ER2P0CX66 ECM3YOR092W 1842 nt5.82□□□□□ -1.48
TY1A-ER2P0CX66 AFG1YEL052W 1530 nt5.82□□□□□ -1.48
TY1A-ER2P0CX66 HPR1YDR138W 2259 nt5.82□□□□□ -1.48
TY1A-ER2P0CX66 GEX2YKR106W 1848 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 TUB3YML124C 1338 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 ARP5YNL059C 2268 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 PEP7YDR323C 1548 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 YDR431WYDR431W 312 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 PPM1YDR435C 987 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 SDH7YDR511W 402 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 PMI40YER003C 1290 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 FUN14YAL008W 597 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 YJL213WYJL213W 996 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 YNL338WYNL338W 159 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 FRM2YCL026C-A 582 nt5.81□□□□□ -1.48
TY1A-ER2P0CX66 ZUO1YGR285C 1302 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 HRD1YOL013C 1656 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 JAC1YGL018C 555 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 THI4YGR144W 981 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 TDH3YGR192C 999 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 LSO1YJR005C-A 282 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 TDH2YJR009C 999 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 LCL2YLR104W 396 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 MRPL19YNL185C 477 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 MET31YPL038W 534 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 YCL023CYCL023C 348 nt5.8□□□□□ -1.48
TY1A-ER2P0CX66 ALE1YOR175C 1860 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 YDR115WYDR115W 318 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 PDA1YER178W 1263 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 MRS1YIR021W 1092 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 RPL19BYBL027W 570 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 YCL022CYCL022C 516 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 POF1YCL047C 777 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 SER33YIL074C 1410 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 YBP2YGL060W 1926 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 TDA7YNL176C 1911 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 YJR003CYJR003C 1560 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 RIX7YLL034C 2514 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 YJR015WYJR015W 1533 nt5.79□□□□□ -1.48
TY1A-ER2P0CX66 YME1YPR024W 2244 nt5.78□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 66.4 ms