Protein–RNA interactions for Protein: P0C5Z0

H2AFB2, Histone H2A-Bbd type 2/3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB2P0C5Z0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
H2AFB2P0C5Z0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
H2AFB2P0C5Z0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.21■□□□□ 0.5
H2AFB2P0C5Z0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 MIR3648-2-201ENST00000581792 180 ntBASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 MIR3648-1-201ENST00000615959 180 ntBASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 GABARAPL3-202ENST00000624044 1851 ntBASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2AFB2P0C5Z0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 OXCT2P1-201ENST00000447263 1535 ntBASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 CA15P2-201ENST00000611168 834 ntBASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2AFB2P0C5Z0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 AFG3L1P-217ENST00000557444 2447 ntBASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2AFB2P0C5Z0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2AFB2P0C5Z0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 AC087393.1-201ENST00000582896 145 ntBASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
H2AFB2P0C5Z0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms