Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.23■■□□□ 1.15
CD48P09326 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.23■■□□□ 1.15
CD48P09326 AC027682.1-201ENST00000562846 899 ntBASIC22.23■■□□□ 1.15
CD48P09326 AL355001.2-201ENST00000620617 1191 ntBASIC22.23■■□□□ 1.15
CD48P09326 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CD48P09326 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.23■■□□□ 1.15
CD48P09326 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.23■■□□□ 1.15
CD48P09326 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.23■■□□□ 1.15
CD48P09326 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CD48P09326 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.22■■□□□ 1.15
CD48P09326 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.22■■□□□ 1.15
CD48P09326 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.22■■□□□ 1.15
CD48P09326 AL136967.2-201ENST00000623968 743 ntBASIC22.22■■□□□ 1.15
CD48P09326 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.22■■□□□ 1.15
CD48P09326 TSPY26P-201ENST00000476365 1326 ntBASIC22.22■■□□□ 1.15
CD48P09326 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.22■■□□□ 1.15
CD48P09326 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CD48P09326 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.22■■□□□ 1.15
CD48P09326 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CD48P09326 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD48P09326 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD48P09326 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.21■■□□□ 1.15
CD48P09326 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.21■■□□□ 1.15
CD48P09326 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD48P09326 AL139246.5-201ENST00000606645 996 ntBASIC22.21■■□□□ 1.15
CD48P09326 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD48P09326 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CD48P09326 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CD48P09326 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CD48P09326 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.2■■□□□ 1.14
CD48P09326 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CD48P09326 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
CD48P09326 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
CD48P09326 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.2■■□□□ 1.14
CD48P09326 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
CD48P09326 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CD48P09326 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.19■■□□□ 1.14
CD48P09326 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 SUDS3P1-201ENST00000505831 966 ntBASIC22.19■■□□□ 1.14
CD48P09326 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.19■■□□□ 1.14
CD48P09326 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.19■■□□□ 1.14
CD48P09326 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.19■■□□□ 1.14
CD48P09326 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CD48P09326 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CD48P09326 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.19■■□□□ 1.14
CD48P09326 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.19■■□□□ 1.14
CD48P09326 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CD48P09326 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.19■■□□□ 1.14
CD48P09326 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.19■■□□□ 1.14
CD48P09326 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CD48P09326 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.18■■□□□ 1.14
CD48P09326 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD48P09326 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.18■■□□□ 1.14
CD48P09326 AC003102.1-202ENST00000563394 1796 ntBASIC22.18■■□□□ 1.14
CD48P09326 RASA4CP-201ENST00000424092 1398 ntBASIC22.18■■□□□ 1.14
CD48P09326 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.18■■□□□ 1.14
CD48P09326 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD48P09326 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CD48P09326 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.18■■□□□ 1.14
CD48P09326 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CD48P09326 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.18■■□□□ 1.14
CD48P09326 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CD48P09326 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.18■■□□□ 1.14
CD48P09326 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD48P09326 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CD48P09326 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CD48P09326 Z98882.1-201ENST00000622160 2253 ntBASIC22.17■■□□□ 1.14
CD48P09326 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CD48P09326 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CD48P09326 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.17■■□□□ 1.14
CD48P09326 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD48P09326 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD48P09326 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.16■■□□□ 1.14
CD48P09326 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CD48P09326 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD48P09326 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CD48P09326 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.16■■□□□ 1.14
CD48P09326 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.16■■□□□ 1.14
CD48P09326 AL034346.1-201ENST00000568244 1277 ntBASIC22.16■■□□□ 1.14
CD48P09326 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD48P09326 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD48P09326 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD48P09326 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CD48P09326 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms