Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
TPM3P06753 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TPM3P06753 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TPM3P06753 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TPM3P06753 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
TPM3P06753 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TPM3P06753 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.91■■□□□ 1.42
TPM3P06753 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TPM3P06753 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TPM3P06753 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
TPM3P06753 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.91■■□□□ 1.42
TPM3P06753 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
TPM3P06753 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
TPM3P06753 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
TPM3P06753 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TPM3P06753 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
TPM3P06753 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.91■■□□□ 1.42
TPM3P06753 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.91■■□□□ 1.42
TPM3P06753 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
TPM3P06753 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TPM3P06753 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.9■■□□□ 1.42
TPM3P06753 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 AC103834.1-201ENST00000520383 144 ntBASIC23.9■■□□□ 1.42
TPM3P06753 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.9■■□□□ 1.42
TPM3P06753 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.9■■□□□ 1.42
TPM3P06753 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.9■■□□□ 1.42
TPM3P06753 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 LINC01006-201ENST00000333319 2292 ntBASIC23.9■■□□□ 1.42
TPM3P06753 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TPM3P06753 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TPM3P06753 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TPM3P06753 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TPM3P06753 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
TPM3P06753 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
TPM3P06753 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TPM3P06753 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TPM3P06753 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TPM3P06753 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
TPM3P06753 AC007952.6-201ENST00000573168 2673 ntBASIC23.89■■□□□ 1.41
TPM3P06753 AC003957.1-201ENST00000625108 2673 ntBASIC23.89■■□□□ 1.41
TPM3P06753 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
TPM3P06753 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TPM3P06753 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TPM3P06753 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TPM3P06753 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TPM3P06753 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TPM3P06753 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
TPM3P06753 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TPM3P06753 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TPM3P06753 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
TPM3P06753 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TPM3P06753 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
TPM3P06753 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TPM3P06753 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
TPM3P06753 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TPM3P06753 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TPM3P06753 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TPM3P06753 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
TPM3P06753 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
TPM3P06753 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.87■■□□□ 1.41
TPM3P06753 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.87■■□□□ 1.41
TPM3P06753 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TPM3P06753 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.87■■□□□ 1.41
TPM3P06753 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.87■■□□□ 1.41
TPM3P06753 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TPM3P06753 KRT8P33-201ENST00000508125 1423 ntBASIC23.87■■□□□ 1.41
TPM3P06753 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TPM3P06753 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
TPM3P06753 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TPM3P06753 AL031848.2-201ENST00000607670 837 ntBASIC23.87■■□□□ 1.41
TPM3P06753 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.87■■□□□ 1.41
TPM3P06753 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TPM3P06753 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
TPM3P06753 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TPM3P06753 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TPM3P06753 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TPM3P06753 AC021242.3-201ENST00000607598 1377 ntBASIC23.87■■□□□ 1.41
TPM3P06753 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.87■■□□□ 1.41
TPM3P06753 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.86■■□□□ 1.41
TPM3P06753 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.86■■□□□ 1.41
TPM3P06753 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.86■■□□□ 1.41
TPM3P06753 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC23.86■■□□□ 1.41
TPM3P06753 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TPM3P06753 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TPM3P06753 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.86■■□□□ 1.41
TPM3P06753 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TPM3P06753 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TPM3P06753 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TPM3P06753 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TPM3P06753 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TPM3P06753 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms