Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 pRNA.5-201ENST00000612139 90 ntBASIC19.34■□□□□ 0.69
HMGN1P05114 pRNA.11-201ENST00000618423 90 ntBASIC19.34■□□□□ 0.69
HMGN1P05114 pRNA.13-201ENST00000619112 90 ntBASIC19.34■□□□□ 0.69
HMGN1P05114 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGN1P05114 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGN1P05114 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGN1P05114 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HMGN1P05114 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.34■□□□□ 0.69
HMGN1P05114 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HMGN1P05114 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HMGN1P05114 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGN1P05114 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HMGN1P05114 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGN1P05114 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
HMGN1P05114 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.33■□□□□ 0.69
HMGN1P05114 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGN1P05114 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HMGN1P05114 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGN1P05114 AC087239.1-201ENST00000622671 572 ntBASIC19.33■□□□□ 0.68
HMGN1P05114 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGN1P05114 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGN1P05114 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGN1P05114 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGN1P05114 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGN1P05114 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGN1P05114 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HMGN1P05114 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HMGN1P05114 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGN1P05114 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGN1P05114 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HMGN1P05114 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGN1P05114 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGN1P05114 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGN1P05114 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGN1P05114 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGN1P05114 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGN1P05114 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGN1P05114 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGN1P05114 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.32■□□□□ 0.68
HMGN1P05114 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HMGN1P05114 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
HMGN1P05114 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HMGN1P05114 AC026471.6-201ENST00000622954 1905 ntBASIC19.31■□□□□ 0.68
HMGN1P05114 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HMGN1P05114 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGN1P05114 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGN1P05114 AF106564.1-201ENST00000607058 2553 ntBASIC19.31■□□□□ 0.68
HMGN1P05114 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGN1P05114 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
HMGN1P05114 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGN1P05114 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGN1P05114 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.31■□□□□ 0.68
HMGN1P05114 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGN1P05114 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HMGN1P05114 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGN1P05114 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HMGN1P05114 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HMGN1P05114 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGN1P05114 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGN1P05114 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGN1P05114 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGN1P05114 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGN1P05114 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGN1P05114 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGN1P05114 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGN1P05114 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGN1P05114 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGN1P05114 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGN1P05114 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGN1P05114 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGN1P05114 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGN1P05114 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGN1P05114 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGN1P05114 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HMGN1P05114 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.29■□□□□ 0.68
HMGN1P05114 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGN1P05114 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGN1P05114 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGN1P05114 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGN1P05114 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGN1P05114 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGN1P05114 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGN1P05114 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGN1P05114 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGN1P05114 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGN1P05114 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGN1P05114 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMGN1P05114 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGN1P05114 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.28■□□□□ 0.68
HMGN1P05114 OXCT2P1-201ENST00000447263 1535 ntBASIC19.28■□□□□ 0.68
HMGN1P05114 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGN1P05114 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGN1P05114 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
HMGN1P05114 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGN1P05114 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGN1P05114 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.28■□□□□ 0.68
HMGN1P05114 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HMGN1P05114 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
HMGN1P05114 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.27■□□□□ 0.68
HMGN1P05114 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms