Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPK3AO75631 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
UPK3AO75631 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.17■□□□□ 0.66
UPK3AO75631 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPK3AO75631 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPK3AO75631 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
UPK3AO75631 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPK3AO75631 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK3AO75631 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK3AO75631 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK3AO75631 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
UPK3AO75631 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPK3AO75631 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.16■□□□□ 0.66
UPK3AO75631 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPK3AO75631 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.16■□□□□ 0.66
UPK3AO75631 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK3AO75631 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.16■□□□□ 0.66
UPK3AO75631 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPK3AO75631 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.16■□□□□ 0.66
UPK3AO75631 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK3AO75631 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UPK3AO75631 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
UPK3AO75631 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.15■□□□□ 0.66
UPK3AO75631 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.15■□□□□ 0.66
UPK3AO75631 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.15■□□□□ 0.66
UPK3AO75631 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UPK3AO75631 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.15■□□□□ 0.66
UPK3AO75631 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.15■□□□□ 0.66
UPK3AO75631 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UPK3AO75631 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK3AO75631 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UPK3AO75631 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
UPK3AO75631 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UPK3AO75631 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 AL024507.2-201ENST00000606070 2574 ntBASIC19.14■□□□□ 0.65
UPK3AO75631 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 MIR572-201ENST00000384983 95 ntBASIC19.14■□□□□ 0.65
UPK3AO75631 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.14■□□□□ 0.65
UPK3AO75631 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.14■□□□□ 0.65
UPK3AO75631 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.14■□□□□ 0.65
UPK3AO75631 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UPK3AO75631 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK3AO75631 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK3AO75631 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UPK3AO75631 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPK3AO75631 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.13■□□□□ 0.65
UPK3AO75631 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPK3AO75631 ZNRF2P3-201ENST00000424200 374 ntBASIC19.13■□□□□ 0.65
UPK3AO75631 OR7E47P-201ENST00000546390 1422 ntBASIC19.13■□□□□ 0.65
UPK3AO75631 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.13■□□□□ 0.65
UPK3AO75631 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.13■□□□□ 0.65
UPK3AO75631 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
UPK3AO75631 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK3AO75631 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPK3AO75631 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 AC244015.2-201ENST00000616358 1861 ntBASIC19.12■□□□□ 0.65
UPK3AO75631 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.12■□□□□ 0.65
UPK3AO75631 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.12■□□□□ 0.65
UPK3AO75631 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.12■□□□□ 0.65
UPK3AO75631 SMUG1P1-201ENST00000590640 811 ntBASIC19.12■□□□□ 0.65
UPK3AO75631 AC105233.4-201ENST00000642045 216 ntBASIC19.12■□□□□ 0.65
UPK3AO75631 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.12■□□□□ 0.65
UPK3AO75631 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UPK3AO75631 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.12■□□□□ 0.65
UPK3AO75631 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.12■□□□□ 0.65
UPK3AO75631 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK3AO75631 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UPK3AO75631 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UPK3AO75631 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.11■□□□□ 0.65
UPK3AO75631 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
UPK3AO75631 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.11■□□□□ 0.65
UPK3AO75631 IRS3P-201ENST00000223076 1006 ntBASIC19.11■□□□□ 0.65
UPK3AO75631 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms