Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NOBOXO60393 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NOBOXO60393 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.16■□□□□ 0.98
NOBOXO60393 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NOBOXO60393 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOBOXO60393 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOBOXO60393 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.15■□□□□ 0.98
NOBOXO60393 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.15■□□□□ 0.98
NOBOXO60393 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOBOXO60393 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOBOXO60393 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NOBOXO60393 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOBOXO60393 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.15■□□□□ 0.98
NOBOXO60393 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.15■□□□□ 0.98
NOBOXO60393 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.15■□□□□ 0.98
NOBOXO60393 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NOBOXO60393 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NOBOXO60393 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NOBOXO60393 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NOBOXO60393 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NOBOXO60393 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOBOXO60393 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOBOXO60393 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOBOXO60393 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.14■□□□□ 0.97
NOBOXO60393 AC006015.1-201ENST00000429970 570 ntBASIC21.14■□□□□ 0.97
NOBOXO60393 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
NOBOXO60393 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOBOXO60393 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOBOXO60393 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NOBOXO60393 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NOBOXO60393 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NOBOXO60393 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOBOXO60393 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOBOXO60393 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NOBOXO60393 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOBOXO60393 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOBOXO60393 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOBOXO60393 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
NOBOXO60393 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.13■□□□□ 0.97
NOBOXO60393 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.13■□□□□ 0.97
NOBOXO60393 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NOBOXO60393 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NOBOXO60393 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOBOXO60393 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOBOXO60393 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOBOXO60393 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.12■□□□□ 0.97
NOBOXO60393 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOBOXO60393 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.12■□□□□ 0.97
NOBOXO60393 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NOBOXO60393 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NOBOXO60393 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NOBOXO60393 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NOBOXO60393 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOBOXO60393 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NOBOXO60393 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOBOXO60393 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
NOBOXO60393 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.11■□□□□ 0.97
NOBOXO60393 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.11■□□□□ 0.97
NOBOXO60393 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.11■□□□□ 0.97
NOBOXO60393 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.11■□□□□ 0.97
NOBOXO60393 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.11■□□□□ 0.97
NOBOXO60393 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NOBOXO60393 AC137761.2-201ENST00000561729 223 ntBASIC21.11■□□□□ 0.97
NOBOXO60393 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.11■□□□□ 0.97
NOBOXO60393 AC145350.3-201ENST00000569033 163 ntBASIC21.11■□□□□ 0.97
NOBOXO60393 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.11■□□□□ 0.97
NOBOXO60393 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NOBOXO60393 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.11■□□□□ 0.97
NOBOXO60393 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOBOXO60393 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NOBOXO60393 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.1■□□□□ 0.97
NOBOXO60393 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NOBOXO60393 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NOBOXO60393 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NOBOXO60393 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.1■□□□□ 0.97
NOBOXO60393 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.1■□□□□ 0.97
NOBOXO60393 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.1■□□□□ 0.97
NOBOXO60393 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NOBOXO60393 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NOBOXO60393 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.1■□□□□ 0.97
NOBOXO60393 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.1■□□□□ 0.97
NOBOXO60393 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.1■□□□□ 0.97
NOBOXO60393 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NOBOXO60393 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
NOBOXO60393 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NOBOXO60393 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NOBOXO60393 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NOBOXO60393 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NOBOXO60393 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NOBOXO60393 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.09■□□□□ 0.97
NOBOXO60393 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.09■□□□□ 0.97
NOBOXO60393 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.09■□□□□ 0.97
NOBOXO60393 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.09■□□□□ 0.97
NOBOXO60393 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NOBOXO60393 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.09■□□□□ 0.97
NOBOXO60393 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
NOBOXO60393 LINC01960-201ENST00000563759 1884 ntBASIC21.09■□□□□ 0.97
NOBOXO60393 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NOBOXO60393 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NOBOXO60393 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms