Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP2O43734 FBXW4P1-201ENST00000426721 2239 ntBASIC19.09■□□□□ 0.65
TRAF3IP2O43734 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAF3IP2O43734 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.08■□□□□ 0.65
TRAF3IP2O43734 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.08■□□□□ 0.65
TRAF3IP2O43734 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP2O43734 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.08■□□□□ 0.64
TRAF3IP2O43734 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP2O43734 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 AC012414.1-201ENST00000556676 535 ntBASIC19.07■□□□□ 0.64
TRAF3IP2O43734 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAF3IP2O43734 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 AC019069.1-201ENST00000610008 1333 ntBASIC19.06■□□□□ 0.64
TRAF3IP2O43734 AP006587.3-201ENST00000525742 1516 ntBASIC19.06■□□□□ 0.64
TRAF3IP2O43734 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAF3IP2O43734 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 AL354811.1-201ENST00000610286 706 ntBASIC19.05■□□□□ 0.64
TRAF3IP2O43734 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 BX005040.4-201ENST00000637145 1518 ntBASIC19.05■□□□□ 0.64
TRAF3IP2O43734 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAF3IP2O43734 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 IRS3P-201ENST00000223076 1006 ntBASIC19.04■□□□□ 0.64
TRAF3IP2O43734 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.04■□□□□ 0.64
TRAF3IP2O43734 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms