Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNAI2O43623 MIR6722-201ENST00000617286 78 ntBASIC15.92■□□□□ 0.14
SNAI2O43623 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.92■□□□□ 0.14
SNAI2O43623 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.92■□□□□ 0.14
SNAI2O43623 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SNAI2O43623 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNAI2O43623 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.92■□□□□ 0.14
SNAI2O43623 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.92■□□□□ 0.14
SNAI2O43623 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNAI2O43623 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNAI2O43623 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SNAI2O43623 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.91■□□□□ 0.14
SNAI2O43623 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.91■□□□□ 0.14
SNAI2O43623 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.91■□□□□ 0.14
SNAI2O43623 AC004987.1-201ENST00000428627 508 ntBASIC15.91■□□□□ 0.14
SNAI2O43623 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SNAI2O43623 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SNAI2O43623 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SNAI2O43623 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.91■□□□□ 0.14
SNAI2O43623 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.91■□□□□ 0.14
SNAI2O43623 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNAI2O43623 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.9■□□□□ 0.14
SNAI2O43623 AC005229.4-201ENST00000610085 2198 ntBASIC15.9■□□□□ 0.14
SNAI2O43623 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.9■□□□□ 0.14
SNAI2O43623 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.9■□□□□ 0.14
SNAI2O43623 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SNAI2O43623 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SNAI2O43623 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.9■□□□□ 0.14
SNAI2O43623 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.9■□□□□ 0.14
SNAI2O43623 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 AC137630.3-201ENST00000607245 391 ntBASIC15.9■□□□□ 0.14
SNAI2O43623 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC15.9■□□□□ 0.14
SNAI2O43623 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNAI2O43623 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.89■□□□□ 0.13
SNAI2O43623 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SNAI2O43623 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.89■□□□□ 0.13
SNAI2O43623 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
SNAI2O43623 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.89■□□□□ 0.13
SNAI2O43623 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
SNAI2O43623 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNAI2O43623 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.89■□□□□ 0.13
SNAI2O43623 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.88■□□□□ 0.13
SNAI2O43623 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.88■□□□□ 0.13
SNAI2O43623 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.88■□□□□ 0.13
SNAI2O43623 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SNAI2O43623 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SNAI2O43623 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SNAI2O43623 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SNAI2O43623 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.87■□□□□ 0.13
SNAI2O43623 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SNAI2O43623 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms