Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
PAX4O43316 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.23■□□□□ 0.03
PAX4O43316 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PAX4O43316 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PAX4O43316 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.23■□□□□ 0.03
PAX4O43316 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.23■□□□□ 0.03
PAX4O43316 IGHV3-19-201ENST00000521488 291 ntBASIC15.23■□□□□ 0.03
PAX4O43316 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.23■□□□□ 0.03
PAX4O43316 AC080038.3-201ENST00000623346 1952 ntBASIC15.23■□□□□ 0.03
PAX4O43316 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PAX4O43316 OR7E47P-201ENST00000546390 1422 ntBASIC15.23■□□□□ 0.03
PAX4O43316 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PAX4O43316 AIRN-201ENST00000601203 4374 ntBASIC15.23■□□□□ 0.03
PAX4O43316 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PAX4O43316 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PAX4O43316 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PAX4O43316 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PAX4O43316 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.23■□□□□ 0.03
PAX4O43316 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PAX4O43316 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.22■□□□□ 0.03
PAX4O43316 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PAX4O43316 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PAX4O43316 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PAX4O43316 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
PAX4O43316 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PAX4O43316 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PAX4O43316 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PAX4O43316 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.22■□□□□ 0.03
PAX4O43316 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PAX4O43316 AL136967.2-201ENST00000623968 743 ntBASIC15.22■□□□□ 0.03
PAX4O43316 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.22■□□□□ 0.03
PAX4O43316 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.22■□□□□ 0.03
PAX4O43316 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PAX4O43316 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PAX4O43316 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.21■□□□□ 0.03
PAX4O43316 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
PAX4O43316 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.21■□□□□ 0.03
PAX4O43316 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PAX4O43316 TSPY26P-201ENST00000476365 1326 ntBASIC15.21■□□□□ 0.03
PAX4O43316 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PAX4O43316 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
PAX4O43316 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PAX4O43316 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.21■□□□□ 0.03
PAX4O43316 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PAX4O43316 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PAX4O43316 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PAX4O43316 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PAX4O43316 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PAX4O43316 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PAX4O43316 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PAX4O43316 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PAX4O43316 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.21■□□□□ 0.02
PAX4O43316 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
PAX4O43316 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PAX4O43316 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PAX4O43316 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PAX4O43316 ECEL1P1-201ENST00000373592 1742 ntBASIC15.2■□□□□ 0.02
PAX4O43316 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 MIR638-201ENST00000385237 100 ntBASIC15.2■□□□□ 0.02
PAX4O43316 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.2■□□□□ 0.02
PAX4O43316 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.2■□□□□ 0.02
PAX4O43316 SUDS3P1-201ENST00000505831 966 ntBASIC15.2■□□□□ 0.02
PAX4O43316 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.2■□□□□ 0.02
PAX4O43316 AL031432.3-201ENST00000607698 485 ntBASIC15.2■□□□□ 0.02
PAX4O43316 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.2■□□□□ 0.02
PAX4O43316 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PAX4O43316 AC092053.2-201ENST00000640557 1818 ntBASIC15.2■□□□□ 0.02
PAX4O43316 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.19■□□□□ 0.02
PAX4O43316 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.19■□□□□ 0.02
PAX4O43316 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.19■□□□□ 0.02
PAX4O43316 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.19■□□□□ 0.02
PAX4O43316 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.19■□□□□ 0.02
PAX4O43316 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.19■□□□□ 0.02
PAX4O43316 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
PAX4O43316 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.19■□□□□ 0.02
PAX4O43316 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.19■□□□□ 0.02
PAX4O43316 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.19■□□□□ 0.02
PAX4O43316 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.19■□□□□ 0.02
PAX4O43316 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms