Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD9O15198 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.35■□□□□ 0.69
SMAD9O15198 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD9O15198 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.35■□□□□ 0.69
SMAD9O15198 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.35■□□□□ 0.69
SMAD9O15198 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SMAD9O15198 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMAD9O15198 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMAD9O15198 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD9O15198 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD9O15198 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMAD9O15198 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
SMAD9O15198 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD9O15198 AL354811.1-201ENST00000610286 706 ntBASIC19.34■□□□□ 0.69
SMAD9O15198 AL358852.1-201ENST00000623174 1268 ntBASIC19.34■□□□□ 0.69
SMAD9O15198 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.34■□□□□ 0.69
SMAD9O15198 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.34■□□□□ 0.69
SMAD9O15198 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMAD9O15198 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMAD9O15198 OR7E47P-201ENST00000546390 1422 ntBASIC19.34■□□□□ 0.69
SMAD9O15198 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD9O15198 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD9O15198 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD9O15198 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD9O15198 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD9O15198 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.33■□□□□ 0.69
SMAD9O15198 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SMAD9O15198 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMAD9O15198 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD9O15198 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD9O15198 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.33■□□□□ 0.68
SMAD9O15198 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SMAD9O15198 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD9O15198 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.33■□□□□ 0.68
SMAD9O15198 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.33■□□□□ 0.68
SMAD9O15198 MIR6084-201ENST00000622012 110 ntBASIC19.33■□□□□ 0.68
SMAD9O15198 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD9O15198 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD9O15198 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.33■□□□□ 0.68
SMAD9O15198 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMAD9O15198 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SMAD9O15198 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD9O15198 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD9O15198 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SMAD9O15198 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SMAD9O15198 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.32■□□□□ 0.68
SMAD9O15198 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.32■□□□□ 0.68
SMAD9O15198 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.32■□□□□ 0.68
SMAD9O15198 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.32■□□□□ 0.68
SMAD9O15198 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD9O15198 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.32■□□□□ 0.68
SMAD9O15198 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SMAD9O15198 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMAD9O15198 GUSBP5-202ENST00000510805 1989 ntBASIC19.32■□□□□ 0.68
SMAD9O15198 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.31■□□□□ 0.68
SMAD9O15198 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.31■□□□□ 0.68
SMAD9O15198 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.31■□□□□ 0.68
SMAD9O15198 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMAD9O15198 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.31■□□□□ 0.68
SMAD9O15198 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SMAD9O15198 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.31■□□□□ 0.68
SMAD9O15198 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMAD9O15198 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SMAD9O15198 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.3■□□□□ 0.68
SMAD9O15198 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.3■□□□□ 0.68
SMAD9O15198 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMAD9O15198 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMAD9O15198 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
SMAD9O15198 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD9O15198 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SMAD9O15198 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMAD9O15198 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.29■□□□□ 0.68
SMAD9O15198 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMAD9O15198 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMAD9O15198 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms