Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM38O00635 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM38O00635 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIM38O00635 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM38O00635 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM38O00635 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM38O00635 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM38O00635 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM38O00635 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM38O00635 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM38O00635 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM38O00635 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM38O00635 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM38O00635 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM38O00635 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.49■■□□□ 1.03
TRIM38O00635 TPRG1LP1-201ENST00000598702 760 ntBASIC21.49■■□□□ 1.03
TRIM38O00635 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRIM38O00635 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM38O00635 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM38O00635 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM38O00635 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM38O00635 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM38O00635 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM38O00635 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM38O00635 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM38O00635 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM38O00635 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM38O00635 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM38O00635 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM38O00635 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM38O00635 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM38O00635 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM38O00635 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM38O00635 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM38O00635 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM38O00635 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM38O00635 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM38O00635 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
TRIM38O00635 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM38O00635 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM38O00635 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM38O00635 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRIM38O00635 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM38O00635 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM38O00635 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM38O00635 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
TRIM38O00635 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
TRIM38O00635 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
TRIM38O00635 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
TRIM38O00635 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
TRIM38O00635 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.46■■□□□ 1.03
TRIM38O00635 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM38O00635 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM38O00635 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 AC004687.1-201ENST00000579003 1625 ntBASIC21.46■■□□□ 1.03
TRIM38O00635 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM38O00635 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM38O00635 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM38O00635 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM38O00635 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM38O00635 AC006015.1-201ENST00000429970 570 ntBASIC21.45■■□□□ 1.02
TRIM38O00635 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM38O00635 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM38O00635 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM38O00635 AC080038.1-201ENST00000611274 1154 ntBASIC21.45■■□□□ 1.02
TRIM38O00635 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM38O00635 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRIM38O00635 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM38O00635 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM38O00635 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM38O00635 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 AC079630.1-202ENST00000618127 1840 ntBASIC21.45■■□□□ 1.02
TRIM38O00635 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM38O00635 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM38O00635 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM38O00635 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM38O00635 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM38O00635 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.44■■□□□ 1.02
TRIM38O00635 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM38O00635 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM38O00635 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms