Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHL1O00533 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHL1O00533 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHL1O00533 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHL1O00533 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHL1O00533 AL137784.2-201ENST00000607332 1000 ntBASIC27.72■■■□□ 2.03
CHL1O00533 AC104187.1-201ENST00000607510 612 ntBASIC27.72■■■□□ 2.03
CHL1O00533 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHL1O00533 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
CHL1O00533 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHL1O00533 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CHL1O00533 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CHL1O00533 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CHL1O00533 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.71■■■□□ 2.03
CHL1O00533 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CHL1O00533 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.71■■■□□ 2.03
CHL1O00533 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CHL1O00533 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.71■■■□□ 2.03
CHL1O00533 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.71■■■□□ 2.03
CHL1O00533 GUSBP5-202ENST00000510805 1989 ntBASIC27.71■■■□□ 2.03
CHL1O00533 AC242852.2-201ENST00000615738 1807 ntBASIC27.71■■■□□ 2.03
CHL1O00533 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHL1O00533 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHL1O00533 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHL1O00533 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC27.7■■■□□ 2.03
CHL1O00533 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
CHL1O00533 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.7■■■□□ 2.03
CHL1O00533 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC27.7■■■□□ 2.03
CHL1O00533 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
CHL1O00533 DBI-210ENST00000542275 757 ntTSL 5 BASIC27.7■■■□□ 2.02
CHL1O00533 EEF1DP3-203ENST00000566025 782 ntBASIC27.7■■■□□ 2.02
CHL1O00533 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
CHL1O00533 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC27.7■■■□□ 2.02
CHL1O00533 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CHL1O00533 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CHL1O00533 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHL1O00533 AC026471.6-201ENST00000622954 1905 ntBASIC27.69■■■□□ 2.02
CHL1O00533 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.69■■■□□ 2.02
CHL1O00533 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHL1O00533 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CHL1O00533 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHL1O00533 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.69■■■□□ 2.02
CHL1O00533 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.69■■■□□ 2.02
CHL1O00533 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CHL1O00533 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.69■■■□□ 2.02
CHL1O00533 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CHL1O00533 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CHL1O00533 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CHL1O00533 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.68■■■□□ 2.02
CHL1O00533 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CHL1O00533 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.68■■■□□ 2.02
CHL1O00533 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CHL1O00533 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC27.68■■■□□ 2.02
CHL1O00533 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
CHL1O00533 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHL1O00533 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
CHL1O00533 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.67■■■□□ 2.02
CHL1O00533 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.67■■■□□ 2.02
CHL1O00533 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHL1O00533 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.67■■■□□ 2.02
CHL1O00533 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.67■■■□□ 2.02
CHL1O00533 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
CHL1O00533 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHL1O00533 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.67■■■□□ 2.02
CHL1O00533 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CHL1O00533 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHL1O00533 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CHL1O00533 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC27.67■■■□□ 2.02
CHL1O00533 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
CHL1O00533 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.67■■■□□ 2.02
CHL1O00533 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CHL1O00533 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHL1O00533 SERP1-208ENST00000491660 830 ntTSL 2 BASIC27.66■■■□□ 2.02
CHL1O00533 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.66■■■□□ 2.02
CHL1O00533 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
CHL1O00533 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHL1O00533 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CHL1O00533 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC27.66■■■□□ 2.02
CHL1O00533 AC003102.1-202ENST00000563394 1796 ntBASIC27.65■■■□□ 2.02
CHL1O00533 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC27.65■■■□□ 2.02
CHL1O00533 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.65■■■□□ 2.02
CHL1O00533 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC27.65■■■□□ 2.02
CHL1O00533 AC004911.1-201ENST00000416316 871 ntBASIC27.65■■■□□ 2.02
CHL1O00533 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.65■■■□□ 2.02
CHL1O00533 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CHL1O00533 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.65■■■□□ 2.02
CHL1O00533 AC137761.2-201ENST00000561729 223 ntBASIC27.65■■■□□ 2.02
CHL1O00533 AC145350.3-201ENST00000569033 163 ntBASIC27.65■■■□□ 2.02
CHL1O00533 AC053503.5-201ENST00000601508 636 ntBASIC27.65■■■□□ 2.02
CHL1O00533 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.65■■■□□ 2.02
CHL1O00533 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.65■■■□□ 2.02
CHL1O00533 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CHL1O00533 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.65■■■□□ 2.02
CHL1O00533 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHL1O00533 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHL1O00533 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHL1O00533 AC138907.5-202ENST00000569484 235 ntBASIC27.64■■■□□ 2.02
CHL1O00533 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHL1O00533 AC133561.1-201ENST00000568600 2415 ntBASIC27.63■■■□□ 2.01
CHL1O00533 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms