Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFA4O00483 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.45■□□□□ 0.22
NDUFA4O00483 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.45■□□□□ 0.22
NDUFA4O00483 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDUFA4O00483 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA4O00483 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
NDUFA4O00483 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.44■□□□□ 0.22
NDUFA4O00483 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA4O00483 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA4O00483 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NDUFA4O00483 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFA4O00483 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA4O00483 MIR638-201ENST00000385237 100 ntBASIC16.44■□□□□ 0.22
NDUFA4O00483 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.44■□□□□ 0.22
NDUFA4O00483 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.44■□□□□ 0.22
NDUFA4O00483 AC104564.3-201ENST00000582367 638 ntBASIC16.44■□□□□ 0.22
NDUFA4O00483 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA4O00483 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA4O00483 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.44■□□□□ 0.22
NDUFA4O00483 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDUFA4O00483 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
NDUFA4O00483 AC009237.3-201ENST00000393279 1427 ntBASIC16.44■□□□□ 0.22
NDUFA4O00483 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFA4O00483 FBXW4P1-201ENST00000426721 2239 ntBASIC16.43■□□□□ 0.22
NDUFA4O00483 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA4O00483 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFA4O00483 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA4O00483 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFA4O00483 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA4O00483 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFA4O00483 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA4O00483 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
NDUFA4O00483 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
NDUFA4O00483 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
NDUFA4O00483 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
NDUFA4O00483 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA4O00483 AC010542.4-201ENST00000563151 1910 ntBASIC16.43■□□□□ 0.22
NDUFA4O00483 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFA4O00483 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFA4O00483 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA4O00483 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA4O00483 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA4O00483 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFA4O00483 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFA4O00483 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.42■□□□□ 0.22
NDUFA4O00483 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFA4O00483 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFA4O00483 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFA4O00483 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.42■□□□□ 0.22
NDUFA4O00483 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NDUFA4O00483 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA4O00483 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA4O00483 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFA4O00483 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFA4O00483 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFA4O00483 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NDUFA4O00483 AP006587.3-201ENST00000525742 1516 ntBASIC16.41■□□□□ 0.22
NDUFA4O00483 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
NDUFA4O00483 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NDUFA4O00483 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.41■□□□□ 0.22
NDUFA4O00483 AL354811.1-201ENST00000610286 706 ntBASIC16.41■□□□□ 0.22
NDUFA4O00483 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFA4O00483 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NDUFA4O00483 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFA4O00483 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.4■□□□□ 0.22
NDUFA4O00483 BX005040.4-201ENST00000637145 1518 ntBASIC16.4■□□□□ 0.22
NDUFA4O00483 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NDUFA4O00483 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NDUFA4O00483 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
NDUFA4O00483 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.4■□□□□ 0.22
NDUFA4O00483 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.4■□□□□ 0.22
NDUFA4O00483 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NDUFA4O00483 AC012414.1-201ENST00000556676 535 ntBASIC16.4■□□□□ 0.22
NDUFA4O00483 AL358852.1-201ENST00000623174 1268 ntBASIC16.4■□□□□ 0.22
NDUFA4O00483 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFA4O00483 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms