Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC31.94■■■□□ 2.7
HFM1A2PYH4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
HFM1A2PYH4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC31.93■■■□□ 2.7
HFM1A2PYH4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
HFM1A2PYH4 AC137761.2-201ENST00000561729 223 ntBASIC31.93■■■□□ 2.7
HFM1A2PYH4 AC145350.3-201ENST00000569033 163 ntBASIC31.93■■■□□ 2.7
HFM1A2PYH4 AC138907.5-202ENST00000569484 235 ntBASIC31.93■■■□□ 2.7
HFM1A2PYH4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.93■■■□□ 2.7
HFM1A2PYH4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
HFM1A2PYH4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC31.93■■■□□ 2.7
HFM1A2PYH4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC31.93■■■□□ 2.7
HFM1A2PYH4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
HFM1A2PYH4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC31.93■■■□□ 2.7
HFM1A2PYH4 AC242852.2-201ENST00000615738 1807 ntBASIC31.93■■■□□ 2.7
HFM1A2PYH4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.92■■■□□ 2.7
HFM1A2PYH4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC31.92■■■□□ 2.7
HFM1A2PYH4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
HFM1A2PYH4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
HFM1A2PYH4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC31.92■■■□□ 2.7
HFM1A2PYH4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.92■■■□□ 2.7
HFM1A2PYH4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.92■■■□□ 2.7
HFM1A2PYH4 GUSBP5-202ENST00000510805 1989 ntBASIC31.91■■■□□ 2.7
HFM1A2PYH4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
HFM1A2PYH4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
HFM1A2PYH4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
HFM1A2PYH4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC31.91■■■□□ 2.7
HFM1A2PYH4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
HFM1A2PYH4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC31.91■■■□□ 2.7
HFM1A2PYH4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC31.91■■■□□ 2.7
HFM1A2PYH4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
HFM1A2PYH4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.91■■■□□ 2.7
HFM1A2PYH4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
HFM1A2PYH4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HFM1A2PYH4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
HFM1A2PYH4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
HFM1A2PYH4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
HFM1A2PYH4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
HFM1A2PYH4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC31.9■■■□□ 2.7
HFM1A2PYH4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31.9■■■□□ 2.7
HFM1A2PYH4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC31.9■■■□□ 2.7
HFM1A2PYH4 RAP2CP1-201ENST00000605103 478 ntBASIC31.9■■■□□ 2.7
HFM1A2PYH4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
HFM1A2PYH4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
HFM1A2PYH4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC31.89■■■□□ 2.7
HFM1A2PYH4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
HFM1A2PYH4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC31.89■■■□□ 2.7
HFM1A2PYH4 FAM99A-202ENST00000538190 1989 ntBASIC31.89■■■□□ 2.7
HFM1A2PYH4 AC026471.6-201ENST00000622954 1905 ntBASIC31.89■■■□□ 2.7
HFM1A2PYH4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.89■■■□□ 2.7
HFM1A2PYH4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC31.89■■■□□ 2.7
HFM1A2PYH4 AC233723.2-201ENST00000623798 2106 ntBASIC31.89■■■□□ 2.7
HFM1A2PYH4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
HFM1A2PYH4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC31.89■■■□□ 2.69
HFM1A2PYH4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
HFM1A2PYH4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC31.88■■■□□ 2.69
HFM1A2PYH4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
HFM1A2PYH4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC31.88■■■□□ 2.69
HFM1A2PYH4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
HFM1A2PYH4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
HFM1A2PYH4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
HFM1A2PYH4 AC053503.5-201ENST00000601508 636 ntBASIC31.88■■■□□ 2.69
HFM1A2PYH4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
HFM1A2PYH4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
HFM1A2PYH4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC31.88■■■□□ 2.69
HFM1A2PYH4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
HFM1A2PYH4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HFM1A2PYH4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
HFM1A2PYH4 AC003102.1-202ENST00000563394 1796 ntBASIC31.87■■■□□ 2.69
HFM1A2PYH4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
HFM1A2PYH4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
HFM1A2PYH4 AC004911.1-201ENST00000416316 871 ntBASIC31.87■■■□□ 2.69
HFM1A2PYH4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC31.87■■■□□ 2.69
HFM1A2PYH4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC31.87■■■□□ 2.69
HFM1A2PYH4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
HFM1A2PYH4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC31.87■■■□□ 2.69
HFM1A2PYH4 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.87■■■□□ 2.69
HFM1A2PYH4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
HFM1A2PYH4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
HFM1A2PYH4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
HFM1A2PYH4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
HFM1A2PYH4 UBE2DNL-204ENST00000602536 740 ntBASIC31.86■■■□□ 2.69
HFM1A2PYH4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
HFM1A2PYH4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
HFM1A2PYH4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
HFM1A2PYH4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HFM1A2PYH4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
HFM1A2PYH4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC31.85■■■□□ 2.69
HFM1A2PYH4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.85■■■□□ 2.69
HFM1A2PYH4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
HFM1A2PYH4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
HFM1A2PYH4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
HFM1A2PYH4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms