Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 AC126544.1-201ENST00000580842 1059 ntBASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 AP004607.7-201ENST00000527152 1677 ntBASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRBV6-4A0A1B0GX49 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRBV6-4A0A1B0GX49 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 IGHV3-19-201ENST00000521488 291 ntBASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 AC133561.4-201ENST00000566112 224 ntBASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.09■□□□□ 0.01
TRBV6-4A0A1B0GX49 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV6-4A0A1B0GX49 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV6-4A0A1B0GX49 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV6-4A0A1B0GX49 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TRBV6-4A0A1B0GX49 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRBV6-4A0A1B0GX49 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.08■□□□□ 0.01
TRBV6-4A0A1B0GX49 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 EDA-201ENST00000338901 1233 ntBASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 AC096631.2-201ENST00000436136 790 ntBASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 PBX2P1-201ENST00000493219 1291 ntBASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 AC027682.1-201ENST00000562846 899 ntBASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 AC106739.1-201ENST00000617035 715 ntBASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TRBV6-4A0A1B0GX49 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.07■□□□□ 0
TRBV6-4A0A1B0GX49 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms