Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF103-CHMP3A0A140T963 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 AC006455.2-201ENST00000429931 906 ntBASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF103-CHMP3A0A140T963 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RNF103-CHMP3A0A140T963 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 CA15P2-201ENST00000611168 834 ntBASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF103-CHMP3A0A140T963 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 MIR3621-201ENST00000580529 85 ntBASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF103-CHMP3A0A140T963 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 AC099791.2-201ENST00000605725 427 ntBASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 pRNA.6-201ENST00000610482 90 ntBASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 pRNA.5-201ENST00000612139 90 ntBASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 pRNA.11-201ENST00000618423 90 ntBASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 pRNA.13-201ENST00000619112 90 ntBASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
RNF103-CHMP3A0A140T963 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 AC133637.1-201ENST00000624115 1537 ntBASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF103-CHMP3A0A140T963 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 AL121603.2-201ENST00000557373 2117 ntBASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
RNF103-CHMP3A0A140T963 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms