Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 AC005837.3-201ENST00000612163 286 ntBASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV7-1A0A0A6YYK4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV7-1A0A0A6YYK4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 AC009237.3-201ENST00000393279 1427 ntBASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 FBXW4P1-201ENST00000426721 2239 ntBASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRBV7-1A0A0A6YYK4 AC010542.4-201ENST00000563151 1910 ntBASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 MIR638-201ENST00000385237 100 ntBASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 AL354811.1-201ENST00000610286 706 ntBASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 BX005040.4-201ENST00000637145 1518 ntBASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV7-1A0A0A6YYK4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms