Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 Z83851.1-201ENST00000420096 545 ntTSL 4 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AL023754.1-201ENST00000424696 863 ntTSL 2 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AC011890.1-201ENST00000427955 303 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AC005730.1-201ENST00000434406 344 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AL365258.2-201ENST00000447479 472 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AP000695.2-202ENST00000454980 649 ntTSL 2 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AC004217.1-201ENST00000469026 794 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AP001972.4-201ENST00000530550 560 ntTSL 4 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AP001775.1-201ENST00000532608 586 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AP006287.1-201ENST00000533995 653 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 CCDC32-204ENST00000558750 814 ntTSL 5 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AC009171.2-201ENST00000573220 318 ntTSL 3 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AC016590.1-203ENST00000590889 547 ntTSL 2 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 MYO5BP1-201ENST00000610994 1239 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 MIR4726-201ENST00000615971 58 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AP003062.2-201ENST00000624288 1117 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 PPIP5K1-207ENST00000396923 5636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AC106820.4-201ENST00000561847 5616 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 AC093330.2-201ENST00000624814 3998 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 MICU1-212ENST00000642044 2221 ntBASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 TGM5-201ENST00000220420 2767 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 SHROOM2-202ENST00000418909 4615 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 TGM5-205ENST00000610827 2756 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 TSTD2-201ENST00000341170 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 TNC-211ENST00000537320 4946 ntTSL 5 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 RASGRP4-208ENST00000587753 3011 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 ADGRE2-204ENST00000392965 2513 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 TTC26-201ENST00000343187 2015 ntTSL 2 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 USP4-204ENST00000416417 1536 ntTSL 2 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 ENOPH1-204ENST00000610545 1542 ntTSL 5 BASIC10.74□□□□□ -0.69
NPIPA3F8WFD2 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 ELMOD3-205ENST00000409344 2564 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 NGRN-202ENST00000379095 7237 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 AC008132.1-201ENST00000419447 2068 ntTSL 5 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 SLC44A3-204ENST00000467909 2061 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 TRIM36-207ENST00000513154 4218 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 FAM49B-220ENST00000522250 1647 ntTSL 5 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 FP565260.3-202ENST00000623960 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 BRD4-201ENST00000263377 7169 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 SDE2-201ENST00000272091 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 ACVR2A-202ENST00000404590 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 NUDT7-201ENST00000268533 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 OR4C12-201ENST00000335238 1063 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CTF2P-201ENST00000412003 604 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 SPATA3-203ENST00000424440 1011 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 OR7E31P-201ENST00000426212 886 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 RRM2P3-201ENST00000426279 1163 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 KRBOX1-203ENST00000426937 826 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CR769776.2-201ENST00000445057 378 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 DANT1-202ENST00000451869 444 ntTSL 3 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 ZEB2P1-201ENST00000515048 1141 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 AC092745.1-202ENST00000539795 602 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 AL139317.1-201ENST00000554548 196 ntTSL 3 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 NUDT7-205ENST00000564085 899 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 GABARAP-206ENST00000577035 762 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 AP000902.1-201ENST00000578806 368 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 NUDT7-207ENST00000613075 1073 ntTSL 3 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 RIN1-208ENST00000627248 243 ntTSL 5 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 PDK3-202ENST00000441463 1921 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 FAN1-203ENST00000561607 2690 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 STRADA-205ENST00000447001 2014 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 MFSD4A-201ENST00000367147 4095 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 TUBAP-201ENST00000425085 1352 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 AC134407.3-201ENST00000624035 2139 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 PRIMPOL-209ENST00000512834 2174 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 SPP1-203ENST00000395080 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 CCT6P1-201ENST00000434500 1544 ntBASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 TBATA-201ENST00000299290 1583 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 TBATA-203ENST00000456372 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
NPIPA3F8WFD2 HCK-208ENST00000534862 1581 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms