Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 GOT1L1-201ENST00000307599 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 HERC2P10-201ENST00000570209 2393 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 DPYD-201ENST00000306031 1779 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 HADH-210ENST00000626637 1774 ntTSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 CD300LG-201ENST00000293396 988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 OR2A42-201ENST00000391496 933 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
MTHFRP42898 CD83P1-201ENST00000405625 572 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 OR2A1-201ENST00000408951 933 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
MTHFRP42898 SFXN5-202ENST00000410065 840 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 RN7SKP73-201ENST00000411075 292 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 LINC00381-201ENST00000423629 727 ntTSL 5 BASIC12.34□□□□□ -0.43
MTHFRP42898 AP001476.2-201ENST00000435738 355 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 FAM86DP-202ENST00000477247 995 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 MGC32805-201ENST00000503529 579 ntTSL 3 BASIC12.34□□□□□ -0.43
MTHFRP42898 AL672043.1-201ENST00000506599 395 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 AC008514.1-203ENST00000518172 574 ntTSL 4 BASIC12.34□□□□□ -0.43
MTHFRP42898 ENPP7P12-201ENST00000526818 631 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 NR1H3-230ENST00000527949 1065 ntTSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 ENPP7P6-201ENST00000529817 929 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 GGTA2P-201ENST00000543442 1125 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 TMEM263-202ENST00000547081 833 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 FAM19A2-214ENST00000551449 580 ntTSL 4 BASIC12.34□□□□□ -0.43
MTHFRP42898 AC073655.2-201ENST00000551941 796 ntTSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 DNM1P38-201ENST00000560794 433 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 SNORD3C-201ENST00000580533 581 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 AL359747.1-202ENST00000606028 918 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 AC025171.5-201ENST00000607830 920 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 Metazoa_SRP.171-201ENST00000614579 289 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 FAM74A3-201ENST00000620271 472 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 TSPAN16-206ENST00000621731 642 ntTSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 ZNF646P1-201ENST00000621811 995 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
MTHFRP42898 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 CCNYL2-201ENST00000472090 1440 ntBASIC12.34□□□□□ -0.43
MTHFRP42898 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
MTHFRP42898 C6orf163-203ENST00000608326 2110 ntTSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC12.34□□□□□ -0.43
MTHFRP42898 TBP-201ENST00000230354 1861 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
MTHFRP42898 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
MTHFRP42898 PABPC1P11-201ENST00000428966 2007 ntBASIC12.33□□□□□ -0.43
MTHFRP42898 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
MTHFRP42898 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 PRG2-204ENST00000533605 1350 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 AL355607.2-201ENST00000563268 1395 ntTSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 LRRC3B-203ENST00000417744 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 ANKS1B-210ENST00000547446 1690 ntTSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 ZNF16-202ENST00000394909 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 CALCB-201ENST00000324229 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 C9orf85-201ENST00000334731 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 DBI-204ENST00000409094 576 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 AC092017.1-201ENST00000431591 659 ntBASIC12.33□□□□□ -0.44
MTHFRP42898 AL392172.1-205ENST00000435378 768 ntTSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 LINC00408-201ENST00000447784 560 ntTSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 SLC25A5P1-201ENST00000450250 898 ntBASIC12.33□□□□□ -0.44
MTHFRP42898 RPS8P4-201ENST00000454541 627 ntBASIC12.33□□□□□ -0.44
MTHFRP42898 RN7SL166P-201ENST00000489872 280 ntBASIC12.33□□□□□ -0.44
MTHFRP42898 KIAA0930-213ENST00000492273 403 ntTSL 3 BASIC12.33□□□□□ -0.44
MTHFRP42898 ADAMTS12-206ENST00000515401 1003 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 AC137579.1-201ENST00000519978 836 ntTSL 3 BASIC12.33□□□□□ -0.44
MTHFRP42898 MYCT1-202ENST00000529453 724 ntTSL 3 BASIC12.33□□□□□ -0.44
MTHFRP42898 AC110058.1-201ENST00000530389 563 ntTSL 4 BASIC12.33□□□□□ -0.44
MTHFRP42898 AC090559.1-202ENST00000532943 851 ntTSL 3 BASIC12.33□□□□□ -0.44
MTHFRP42898 AC079360.1-201ENST00000543848 434 ntTSL 3 BASIC12.33□□□□□ -0.44
MTHFRP42898 LINC00592-201ENST00000549830 1044 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 HP-216ENST00000570083 1270 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 AC091153.4-201ENST00000570493 480 ntTSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 MIR4695-201ENST00000577305 74 ntBASIC12.33□□□□□ -0.44
MTHFRP42898 AC011498.1-201ENST00000591414 478 ntTSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 AC068338.3-201ENST00000617892 418 ntBASIC12.33□□□□□ -0.44
MTHFRP42898 HPD-201ENST00000289004 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
MTHFRP42898 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MTHFRP42898 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
MTHFRP42898 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms