Protein–RNA interactions for Protein: Q9Y5X3

SNX5, Sorting nexin-5, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5Q9Y5X3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX5Q9Y5X3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX5Q9Y5X3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SNX5Q9Y5X3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SNX5Q9Y5X3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX5Q9Y5X3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 KRT18P24-201ENST00000344739 1156 ntBASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX5Q9Y5X3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX5Q9Y5X3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX5Q9Y5X3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX5Q9Y5X3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX5Q9Y5X3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.77■□□□□ 0.76
SNX5Q9Y5X3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX5Q9Y5X3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX5Q9Y5X3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 ATP5G2P3-201ENST00000429083 425 ntBASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 THA1P-201ENST00000590384 1145 ntBASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 AC007952.6-201ENST00000573168 2673 ntBASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 AC003957.1-201ENST00000625108 2673 ntBASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX5Q9Y5X3 LINC01960-201ENST00000563759 1884 ntBASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 AC004987.1-201ENST00000428627 508 ntBASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX5Q9Y5X3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 AF131216.4-201ENST00000638924 1588 ntBASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 MIR4281-201ENST00000580852 62 ntBASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX5Q9Y5X3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 LINC01006-201ENST00000333319 2292 ntBASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX5Q9Y5X3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms