Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MIR663A-201ENST00000385250 93 ntBASIC20.08■□□□□ 0.81
PCDHGA9Q9Y5G4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA9Q9Y5G4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDHGA9Q9Y5G4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PCDHGA9Q9Y5G4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.08■□□□□ 0.81
PCDHGA9Q9Y5G4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA9Q9Y5G4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
PCDHGA9Q9Y5G4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 GPX1P1-201ENST00000388829 606 ntBASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 AC233723.2-201ENST00000623798 2106 ntBASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHGA9Q9Y5G4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA9Q9Y5G4 ABHD17AP1-201ENST00000358206 933 ntBASIC20.06■□□□□ 0.8
PCDHGA9Q9Y5G4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA9Q9Y5G4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA9Q9Y5G4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA9Q9Y5G4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 AL353803.4-201ENST00000565882 1934 ntBASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 EP400NL-214ENST00000641289 2402 ntBASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGA9Q9Y5G4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGA9Q9Y5G4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGA9Q9Y5G4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 AC009237.3-201ENST00000393279 1427 ntBASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 MFSD11-216ENST00000590393 1141 ntBASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 KRT87P-202ENST00000534226 1464 ntBASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHGA9Q9Y5G4 LINC00565-201ENST00000562710 2331 ntBASIC20.02■□□□□ 0.79
PCDHGA9Q9Y5G4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGA9Q9Y5G4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 AC005224.4-201ENST00000583262 1652 ntBASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 AC142086.2-201ENST00000569753 217 ntBASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 AC231657.2-201ENST00000624556 255 ntBASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGA9Q9Y5G4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms